RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 TNNI3P19429 210 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 CCKBRP32239 447 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 PCGF2P35227 344 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 CRATP43155 626 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 PRTGQ2VWP7 1150 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 COX20Q5RI15 118 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 CDCP2Q5VXM1 449 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ABHD17CQ6PCB6 329 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ABHD13Q7L211 337 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 GPR135Q8IZ08 494 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SLC37A3Q8NCC5 494 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 C11orf65Q8NCR3 313 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ZNF501Q96CX3 271 aaPredicted RBP13.28□□□□□ -0.28
MINDY4-202ENST00000409881 MTERF3Q96E29 417 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ZNF285Q96NJ3 590 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 STRADBQ9C0K7 418 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 PPIL3Q9H2H8 161 aaKnown RBP13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SLC25A19Q9HC21 320 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 B3GAT2Q9NPZ5 323 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ACER3Q9NUN7 267 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SERTAD3Q9UJW9 196 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 RABL2BQ9UNT1 228 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ADAMTS20P59510 1910 aa13.27□□□□□ -0.28
MINDY4-202ENST00000409881 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 SOX14O95416 240 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 IL1AP01583 271 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 PIPP12273 146 aaPredicted RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 ETFAP13804 333 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 NAGAP17050 411 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 CTRB1P17538 263 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 TIA1P31483 386 aaKnown RBP eCLIP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF267Q14586 743 aaPredicted RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 ISXQ2M1V0 245 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 DEFB134Q4QY38 66 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 MANEAQ5SRI9 462 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 CTRB2Q6GPI1 263 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 OR4C11Q6IEV9 310 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 NUDT13Q86X67 352 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 SRFBP1Q8NEF9 429 aaKnown RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 OR8K5Q8NH50 307 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 DNAJA4Q8WW22 397 aaPredicted RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 MAPKAP1Q9BPZ7 522 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 DUSP26Q9BV47 211 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 MND1Q9BWT6 205 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 LHX9Q9NQ69 397 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 FAM120CQ9NX05 1096 aaKnown RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 SIDT1Q9NXL6 827 aaKnown RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 AKAP7Q9P0M2 348 aaPredicted RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 CEP250Q9BV73 2442 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 LYRM1O43325 122 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 PROM1O43490 865 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 MPZL2O60487 215 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 PRKAR1AP10644 381 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 CEACAM1P13688 526 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 ATF4P18848 351 aaPredicted RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 BSGP35613 385 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 CLDN20P56880 219 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 RAE1P78406 368 aaKnown RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 BTN3A2P78410 334 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 GRM7Q14831 915 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 PRAMEF17Q5VTA0 474 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 MZT2BQ6NZ67 158 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 DUSP18Q8NEJ0 188 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 TEFMQ96QE5 360 aaKnown RBP13.27□□□□□ -0.29
MINDY4-202ENST00000409881 ANKRA2Q9H9E1 313 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 RARRES3Q9UL19 164 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 CLCA2Q9UQC9 943 aa13.27□□□□□ -0.29
MINDY4-202ENST00000409881 SPTBP11277 2137 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 COL27A1Q8IZC6 1860 aaPredicted RBP13.26□□□□□ -0.29
MINDY4-202ENST00000409881 LINC00862A6NCI5 91 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 FABP7O15540 132 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 GADD45GO95257 159 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 ANXA4P09525 319 aaPredicted RBP13.26□□□□□ -0.29
MINDY4-202ENST00000409881 FAM157BP0CG42 384 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 CCL4P13236 92 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 CERS1P27544 350 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 PER3P56645 1201 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF628Q5EBL2 1059 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 CNIH2Q6PI25 160 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 HSDL2Q6YN16 418 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF793Q6ZN11 406 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 CLDN22Q8N7P3 220 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 NANOGP1Q8N7R0 232 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 AMER3Q8N944 861 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 OR8J2Q8NGG1 315 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 METTL2AQ96IZ6 378 aaKnown RBP13.26□□□□□ -0.29
MINDY4-202ENST00000409881 C10orf90Q96M02 699 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 HYLS1Q96M11 299 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 CMKLR1Q99788 373 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 NMNAT1Q9HAN9 279 aaPredicted RBP13.26□□□□□ -0.29
MINDY4-202ENST00000409881 PRDM7Q9NQW5 492 aa13.26□□□□□ -0.29
MINDY4-202ENST00000409881 C1orf226A1L170 272 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 ZNF860A6NHJ4 632 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 TRIM77I1YAP6 450 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 LGI1O95970 557 aa13.25□□□□□ -0.29
MINDY4-202ENST00000409881 POU4F3Q15319 338 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms