RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 RNF215Q9Y6U7 377 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 A3GALT2U3KPV4 340 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 KNL1Q8NG31 2342 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 SPAG17Q6Q759 2223 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 GON4LQ3T8J9 2241 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 THADAQ6YHU6 1953 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 HTR3EA5X5Y0 456 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 EFCAB9A8MZ26 197 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TMEM150CB9EJG8 249 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TLX2O43763 284 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 AIREO43918 545 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SUSD5O60279 629 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 OR2B3O76000 313 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 MED26O95402 600 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 INHBBP09529 407 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 DBTP11182 482 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 BCKDHBP21953 392 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CD1CP29017 333 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 LCN1P31025 176 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RBM34P42696 430 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RGS6P49758 472 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CLK1P49759 484 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RGS19P49795 217 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RAC1P63000 192 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF91Q05481 1191 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RAB40BQ12829 278 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 FOXD4Q12950 439 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 BNIP3Q12983 259 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 C1DQ13901 141 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 OR1Q1Q15612 314 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 MAPK14Q16539 360 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SYT14P1Q58G82 188 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ARMCX4Q5H9R4 360 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 C19orf48Q6RUI8 117 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF620Q6ZNG0 422 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 GDPGP1Q6ZNW5 385 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 QSOX2Q6ZRP7 698 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 USP43Q70EL4 1123 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 NKAIN4Q8IVV8 208 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 NRMQ8IXM6 262 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF440Q8IYI8 595 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 GPR135Q8IZ08 494 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 LSMEM1Q8N8F7 131 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 POGLUT1Q8NBL1 392 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 KBTBD8Q8NFY9 601 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 BRIX1Q8TDN6 353 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 FGF11Q92914 225 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 FAM46AQ96IP4 442 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SLC41A2Q96JW4 573 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 LRR1Q96L50 414 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CCNL2Q96S94 520 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 GPA33Q99795 319 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TSSK6Q9BXA6 273 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 HOXD1Q9GZZ0 328 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CTPS2Q9NRF8 586 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CUTCQ9NTM9 273 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TBC1D23Q9NUY8 699 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 UCKL1Q9NWZ5 548 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SUSD2Q9UGT4 822 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SLC7A7Q9UM01 511 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 DIMT1Q9UNQ2 313 aaKnown RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CLDN16Q9Y5I7 305 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TRIOBPQ9H2D6 2365 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 GXYLT2A0PJZ3 443 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 EFCAB7A8K855 629 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 KDM4EB2RXH2 506 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 NPIPB9F8W1W9 429 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 H3BMH7 237 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CCRL2O00421 344 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 YKT6O15498 198 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CHP2O43745 196 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 PRKYO43930 277 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SDC3O75056 442 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RCBTB2O95199 551 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 RAB36O95755 333 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 PTHP01270 115 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 THY1P04216 161 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 SCG5P05408 212 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 LIPAP38571 399 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ATP12AP54707 1039 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 CTBP2P56545 445 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 PSPHP78330 225 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 PRKCDQ05655 676 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 FGFBP1Q14512 234 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF267Q14586 743 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-202ENST00000409817 MINDY4Q4G0A6 757 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 C3orf38Q5JPI3 329 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ACSM5Q6NUN0 579 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TMPRSS11FQ6ZWK6 438 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 KIF18BQ86Y91 864 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 OR2T33Q8NG76 320 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 OR9Q1Q8NGQ5 310 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 DYNC2LI1Q8TCX1 351 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 TMEM239Q8WW34 195 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ZHX1-C8orf76Q96EF9 292 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 PLEKHA8Q96JA3 519 aa6.92□□□□□ -1.3
CXCR4-202ENST00000409817 ART5Q96L15 291 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms