RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FAM90A27PA6NNH2 459 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CSTAP01040 98 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CEACAM8P31997 349 aaPredicted RBP28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 SUCLG1P53597 346 aaKnown RBP28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CLDN15P56746 228 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CLDN20P56880 219 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 FADDQ13158 208 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 EIF3MQ7L2H7 374 aaKnown RBP28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 GPR119Q8TDV5 335 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 SMPDL3BQ92485 455 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 LAT2Q9GZY6 243 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 RAD21L1Q9H4I0 556 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 KLHL14Q9P2G3 628 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 PKDREJQ9NTG1 2253 aa28.11■■■□□ 2.09
TRAF3IP1-203ENST00000409739 H0YC42 278 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 SEC14L5O43304 696 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 BCAS1O75363 584 aaPredicted RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 UBTFL6P0CB48 400 aaPredicted RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 RPS4Y1P22090 263 aaKnown RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 PGM1P36871 562 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CCR4P51679 360 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 TPD52P55327 224 aaPredicted RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 FOXF1Q12946 379 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 TOMM34Q15785 309 aaPredicted RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 PLXDC2Q6UX71 529 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 MEIOBQ8N635 442 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 C9orf106Q8NAJ2 232 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 TOR1AIP2Q8NFQ8 470 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 OR5W2Q8NH69 310 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 ARSGQ96EG1 525 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 UCN2Q96RP3 112 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 THUMPD1Q9NXG2 353 aaKnown RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 LEF1Q9UJU2 399 aaPredicted RBP28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 SLC35A3Q9Y2D2 325 aa28.1■■■□□ 2.09
TRAF3IP1-203ENST00000409739 HSPB2A8KAH6 182 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 BCHEP06276 602 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 BMP2P12643 396 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 PLAURQ03405 335 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CBFBQ13951 182 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 HSPB2Q16082 182 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 DLEU7Q6UYE1 221 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 GGNQ86UU5 652 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 LIX1LQ8IVB5 337 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 TSPEARQ8WU66 669 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 SLC38A5Q8WUX1 472 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 ZNF524Q96C55 264 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 UCK2Q9BZX2 261 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 NDUFAF1Q9Y375 327 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 GMEB1Q9Y692 573 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 UNC79Q9P2D8 2635 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CENPEQ02224 2701 aa28.09■■■□□ 2.09
TRAF3IP1-203ENST00000409739 NKX2-6A6NCS4 301 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 AGAP5A6NIR3 686 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CLDN24A6NM45 220 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 C19orf84I3L1E1 186 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CYP7B1O75881 506 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 IL2RAP01589 272 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 TFPTP0C1Z6 253 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 EIF1P41567 113 aaKnown RBP28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 ZNF787Q6DD87 383 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 RETREG3Q86VR2 466 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 C10orf82Q8WW14 230 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 MTHFD2LQ9H903 347 aaPredicted RBP28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 ST6GALNAC1Q9NSC7 600 aaPredicted RBP28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CALML5Q9NZT1 146 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 DSPPQ9NZW4 1301 aa28.08■■■□□ 2.09
TRAF3IP1-203ENST00000409739 CELSR2Q9HCU4 2923 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 ANGPT2O15123 496 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 DNAJA2O60884 412 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 NUDT7P0C024 238 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 PPIBP23284 216 aaKnown RBP28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 ZNF136P52737 540 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 CRISP3P54108 245 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 KCNJ10P78508 379 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 DPP10Q8N608 796 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 TMEM19Q96HH6 336 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 THUMPD3Q9BV44 507 aaKnown RBP28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 IKZF5Q9H5V7 419 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 CHST11Q9NPF2 352 aa28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 NIPSNAP3AQ9UFN0 247 aaPredicted RBP28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 GPC6Q9Y625 555 aaPredicted RBP28.07■■■□□ 2.08
TRAF3IP1-203ENST00000409739 SNRPB2P08579 225 aaKnown RBP28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 PRKCAP17252 672 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 ELK4P28324 431 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 EEFSECP57772 596 aaKnown RBP28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 QPRTQ15274 297 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 RPS26P11Q5JNZ5 115 aaPredicted RBP28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 SP5Q6BEB4 398 aaPredicted RBP28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 DHDDSQ86SQ9 333 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 GRAMD2AQ8IUY3 354 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 C10orf111Q8N326 155 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 METTL25Q8N6Q8 603 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 FBXO27Q8NI29 283 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 WDR60Q8WVS4 1066 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 PMM1Q92871 262 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 WNT2BQ93097 391 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 TREX2Q9BQ50 279 aaPredicted RBP28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 CPPED1Q9BRF8 314 aaPredicted RBP28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 A4GALTQ9NPC4 353 aa28.06■■■□□ 2.08
TRAF3IP1-203ENST00000409739 SAR1AQ9NR31 198 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms