RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 L3MBTL4Q8NA19 623 aa16.61■□□□□ 0.25
SMPD4-202ENST00000409031 TMEM38AQ9H6F2 299 aa16.61■□□□□ 0.25
SMPD4-202ENST00000409031 SEC61A2Q9H9S3 476 aa16.61■□□□□ 0.25
SMPD4-202ENST00000409031 STC2O76061 302 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 NR2C1P13056 603 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 ZNF8P17098 575 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-202ENST00000409031 ARL6IP1Q15041 203 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 NXNL2Q5VZ03 156 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 SBSNQ6UWP8 590 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 ZER1Q7Z7L7 766 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 CPA6Q8N4T0 437 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 OR6M1Q8NGM8 313 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 OR5H2Q8NGV7 314 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 ASB11Q8WXH4 323 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 DPH7Q9BTV6 452 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 ANTXRLA6NF34 631 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 GAAP10253 952 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 CHATP28329 748 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 SLC6A9P48067 706 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 SGSHP51688 502 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 HCCSP53701 268 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 TMEM179BQ7Z7N9 219 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 MEX3DQ86XN8 651 aaKnown RBP16.6■□□□□ 0.25
SMPD4-202ENST00000409031 OR1M1Q8NGA1 313 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 GMLQ99445 158 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 G6PC3Q9BUM1 346 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 NARFLQ9H6Q4 476 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 CSNK1G1Q9HCP0 422 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 DZANK1Q9NVP4 752 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 C5AR2Q9P296 337 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 CCL16O15467 120 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 INHAP05111 366 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 H2BFMP0C1H6 154 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 GP1BBP13224 206 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 CPEP16870 476 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 CBLP22681 906 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 GJA5P36382 358 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 TNFRSF17Q02223 184 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 FAHD1Q6P587 224 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 RDH10Q8IZV5 341 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 NEIL2Q969S2 332 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 SLC5A7Q9GZV3 580 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 PPP4R1LQ9P1A2 415 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 HIF3AQ9Y2N7 669 aa16.6■□□□□ 0.25
SMPD4-202ENST00000409031 FRS3O43559 492 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ELAVL4P26378 380 aaKnown RBP16.59■□□□□ 0.25
SMPD4-202ENST00000409031 NLRC3Q7RTR2 1065 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 OR4E2Q8NGC2 313 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 LGALS14Q8TCE9 139 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SLC25A44Q96H78 314 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-202ENST00000409031 OPALINQ96PE5 141 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 C1QTNF3Q9BXJ4 246 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ISYNA1Q9NPH2 558 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ZNF701Q9NV72 531 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ERVK-21P61565 698 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 LTBQ06643 244 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 PDZK1IP1Q13113 114 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 PIP5KL1Q5T9C9 394 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 LEG1Q6P5S2 330 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 FAM124AQ86V42 546 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 FAM26EQ8N5C1 309 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 PHYHIPQ92561 330 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 KATNB1Q9BVA0 655 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SEMA4GQ9NTN9 838 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 A0A1B0GV50 99 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ZNF726A6NNF4 738 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 HMGN2P05204 90 aaKnown RBP16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ALG10Q5BKT4 473 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 RASGRP3Q8IV61 690 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 HORMAD2Q8N7B1 307 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 GHSRQ92847 366 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 LRIG1Q96JA1 1093 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 CRB3Q9BUF7 120 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 MAN2C1Q9NTJ4 1040 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SLC35A3Q9Y2D2 325 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ZDHHC11BP0C7U3 371 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ELK1P19419 428 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SUMF2Q8NBJ7 301 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SEC22CQ9BRL7 303 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SLC25A32Q9H2D1 315 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 C12orf10Q9HB07 376 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 ACOXLQ9NUZ1 547 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 SLC25A37Q9NYZ2 338 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 PGAP2Q9UHJ9 254 aa16.59■□□□□ 0.25
SMPD4-202ENST00000409031 TMEM88BA6NKF7 163 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 H0YIV9 168 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 K7ERQ8 282 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 CA12O43570 354 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 ACTR1BP42025 376 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 ACTR1AP61163 376 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 ID2Q02363 134 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 ZNF792Q3KQV3 632 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 ARHGAP40Q5TG30 622 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 SLC29A4Q7RTT9 530 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 BPIFB2Q8N4F0 458 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 CYB5D2Q8WUJ1 264 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 SAMD11Q96NU1 681 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 SYT17Q9BSW7 474 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 MED18Q9BUE0 208 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms