RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 H3BNH8 94 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 GTPBP1O00178 669 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 FCMRO60667 390 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 GOSR1O95249 250 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 PLGP00747 810 aaPredicted RBP17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 RAF1P04049 648 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 EIF1P41567 113 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 WDR4P57081 412 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 FGFBP1Q14512 234 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 EXOC3L2Q2M3D2 409 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 PDZK1Q5T2W1 519 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 C22orf34Q6ZV56 151 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF550Q7Z398 422 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 RFWD2Q8NHY2 731 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 FBXO27Q8NI29 283 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 GPR119Q8TDV5 335 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 OSTF1Q92882 214 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 ARSGQ96EG1 525 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 GMPPAQ96IJ6 420 aaPredicted RBP17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 SLC35G5Q96KT7 338 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 KLHL15Q96M94 604 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 MEAF6Q9HAF1 191 aa17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 PAQR5Q9NXK6 330 aaPredicted RBP17.26■□□□□ 0.35
SMARCB1-204ENST00000407422 CENPVL1A0A0U1RR11 272 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 C16orf97H3BN30 126 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 SS18L1O75177 396 aaPredicted RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 SYNGR4O95473 234 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 CPSF4O95639 269 aaKnown RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 LBPP18428 481 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 KEAP1Q14145 624 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 GPR68Q15743 365 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 SPANXN4Q5MJ08 99 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 HHATQ5VTY9 493 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ANKRD34AQ69YU3 496 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 CHDHQ8NE62 594 aaPredicted RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 TESCQ96BS2 214 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 TEX37Q96LM6 180 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 MED18Q9BUE0 208 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 OR51I1Q9H343 314 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 PLSCR4Q9NRQ2 329 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 MKLN1Q9UL63 735 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 PCDHGB4Q9UN71 923 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 EMC9Q9Y3B6 208 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 PRSS51A0A1B0GVH4 220 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 DUXAA6NLW8 204 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 DEFB108AA8MXU0 73 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF195O14628 629 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 C1QCP02747 245 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ALDOCP09972 364 aaKnown RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 PRKCAP17252 672 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 SUMO3P55854 103 aaPredicted RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 NME5P56597 212 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 CARD18P57730 90 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ATP6V1C2Q8NEY4 427 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 OR6K3Q8NGY3 331 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ROBO4Q8WZ75 1007 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 MBD6Q96DN6 1003 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ZC3HAV1LQ96H79 300 aaKnown RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 ALPK1Q96QP1 1244 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 SRXN1Q9BYN0 137 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 KLHL4Q9C0H6 718 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 NMUR2Q9GZQ4 415 aa17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 GPC6Q9Y625 555 aaPredicted RBP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 NIPBLQ6KC79 2804 aaeCLIP17.25■□□□□ 0.35
SMARCB1-204ENST00000407422 TMEM120BA0PK00 339 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 C9JVG2 144 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF264O43296 627 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 TUBBP07437 444 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 OR12D1P0DN82 309 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 UBL4AP11441 157 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 NID1P14543 1247 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 ELK4P28324 431 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 CTBP2P56545 445 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 CASP8Q14790 479 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 ARHGAP11BQ3KRB8 267 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 TNFAIP8L2Q6P589 184 aaPredicted RBP17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 CROCCP2Q86T23 111 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 TGIF2LYQ8IUE0 185 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 TMCO5AQ8N6Q1 288 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 OR5W2Q8NH69 310 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 MGARPQ8TDB4 240 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 RAB8BQ92930 207 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 TMUB1Q9BVT8 246 aa17.24■□□□□ 0.35
SMARCB1-204ENST00000407422 SERINC4A6NH21 518 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 SDHDO14521 159 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 STX11O75558 287 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 UGT2B17O75795 530 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 NTN1O95631 604 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 UQCRC2P22695 453 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ADH6P28332 368 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 CCR4P51679 360 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 UFM1P61960 85 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF141Q15928 474 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 DEFB113Q30KQ7 82 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 TMEM176BQ3YBM2 270 aaPredicted RBP17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 FAM174BQ3ZCQ3 159 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 PDSS1Q5T2R2 415 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ANXA8L1Q5VT79 327 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 HEPHL1Q6MZM0 1159 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 C16orf62Q7Z3J2 963 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms