RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GALEQ14376 348 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 DEFB134Q4QY38 66 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 CEP78Q5JTW2 689 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 DCST2Q5T1A1 773 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PDZK1Q5T2W1 519 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PRPF38BQ5VTL8 546 aaKnown RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 TBC1D3GQ6DHY5 549 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 RPTNQ6XPR3 784 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 YIPF7Q8N8F6 280 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 FANK1Q8TC84 345 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 RFKQ969G6 155 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 NECTIN4Q96NY8 510 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 TMEM246Q9BRR3 403 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PIGUQ9H490 435 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 CYSLTR2Q9NS75 346 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PTGFRNQ9P2B2 879 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PRKAG2Q9UGJ0 569 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ST6GALNAC2Q9UJ37 374 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PCDH15Q96QU1 1955 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 UNC119BA6NIH7 251 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SMLR1H3BR10 107 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 LYRM1O43325 122 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PLPP2O43688 288 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 KCNJ13O60928 360 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 KRT8P05787 483 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 UGT2B7P16662 529 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 MTNR1BP49286 362 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ANXA11P50995 505 aaKnown RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 RPS11P62280 158 aaKnown RBP eCLIP9.11□□□□□ -0.95
MSH2-202ENST00000406134 SLC25A35Q3KQZ1 300 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 LYPD8Q6UX82 237 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 TMPRSS11FQ6ZWK6 438 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SLC37A3Q8NCC5 494 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 OR13C5Q8NGS8 318 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ZCCHC10Q8TBK6 192 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 HAVCR2Q8TDQ0 301 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ADAMTS15Q8TE58 950 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 AP3S1Q92572 193 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SLC7A5P2Q9GIP4 190 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 FN3KQ9H479 309 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 CMC2Q9NRP2 79 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SLCO1C1Q9NYB5 712 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 NLKQ9UBE8 527 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 TNFRSF10DQ9UBN6 386 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 RWDD3Q9Y3V2 267 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 CLCA3PQ9Y6N3 262 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ZNF860A6NHJ4 632 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 HLA-DPB1P04440 258 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 S1PR1P21453 382 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SLC6A1P30531 599 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 PPP1CAP62136 330 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 FOXK2Q01167 660 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 GPR68Q15743 365 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SYCE2Q6PIF2 218 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ZNF619Q8N2I2 560 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 OR5J2Q8NH18 312 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 OR14C36Q8NHC7 312 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ANKRD9Q96BM1 317 aaPredicted RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 RIPOR3Q96MK2 946 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 OR2M4Q96R27 311 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SERINC2Q96SA4 455 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 TBX5Q99593 518 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 MCCC2Q9HCC0 563 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 NLGN3Q9NZ94 848 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 MAT2BQ9NZL9 334 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ICAM5Q9UMF0 924 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SATB2Q9UPW6 733 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 YBX2Q9Y2T7 364 aaKnown RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 IMPA2O14732 288 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TFP02787 698 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 PRKCAP17252 672 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 S100A1P23297 94 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 ACAA2P42765 397 aaKnown RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 EXOSC7Q15024 291 aaKnown RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 SNAP47Q5SQN1 464 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 STPG1Q5TH74 334 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 ZNF776Q68DI1 518 aaPredicted RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 DTX3Q8N9I9 347 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 OR4K14Q8NGD5 310 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 OR5M3Q8NGP4 307 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TMEM239Q8WW34 195 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 COL26A1Q96A83 441 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 ABHD1Q96SE0 405 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TMEM168Q9H0V1 697 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 ERVMER34-1Q9H9K5 563 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 CERS4Q9HA82 394 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 GALNT9Q9HCQ5 603 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 BABAM2Q9NXR7 383 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 GSTK1Q9Y2Q3 226 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 CLDN16Q9Y5I7 305 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TRAV27A0A087WT01 109 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 A0A1B0GVC2 190 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TRAPPC13A5PLN9 417 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 A6NIN4 97 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms