RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 RFC3P40938 356 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 PMP22Q01453 160 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 FOXO1Q12778 655 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 GANABQ14697 944 aaKnown RBP9.6□□□□□ -0.87
RPAIN-204ENST00000405578 SLC10A1Q14973 349 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ADRM1Q16186 407 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 HYAL4Q2M3T9 481 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 EIPR1Q53HC9 387 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 KRTCAP3Q53RY4 240 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF311Q5JNZ3 666 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 C8orf82Q6P1X6 216 aaPredicted RBP9.6□□□□□ -0.87
RPAIN-204ENST00000405578 GFRALQ6UXV0 394 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 CALHM3Q86XJ0 350 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 SLC15A3Q8IY34 581 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ZZZ3Q8IYH5 903 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 DEFB107AQ8IZN7 70 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ARHGAP24Q8N264 748 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 FAM109AQ8N4B1 249 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 GATSQ8NAP1 163 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 TOR1AIP2Q8NFQ8 470 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 OR52P1PQ8NH57 321 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 B4GALNT2Q8NHY0 566 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 SLC26A7Q8TE54 656 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 RNF138Q8WVD3 245 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 WDR60Q8WVS4 1066 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 RASSF5Q8WWW0 418 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 C14orf79Q96F83 325 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 GNRHR2Q96P88 292 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 KCTD14Q9BQ13 255 aaPredicted RBP9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ALG2Q9H553 416 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 PROK2Q9HC23 129 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 CMTM6Q9NX76 183 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 KLHL28Q9NXS3 571 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 FLRT3Q9NZU0 649 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 SEC14L3Q9UDX4 400 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 DKKL1Q9UK85 242 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 C15orf41Q9Y2V0 281 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 MAP1AP78559 2803 aaPredicted RBP9.6□□□□□ -0.87
RPAIN-204ENST00000405578 DSPPQ9NZW4 1301 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 PRRC2AP48634 2157 aaKnown RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 A0A087WZY1 265 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 IGLV3-32A0A0A0MS00 114 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 PINLYPA6NC86 204 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 C2orf72A6NCS6 295 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 LRRC3CA6NJW4 275 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 GYG2O15488 501 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 CYP7B1O75881 506 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 GLSO94925 669 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 NUDT14O95848 222 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 NID1P14543 1247 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 AQP1P29972 269 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 PTGDSP41222 190 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 CA7P43166 264 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 CCR4P51679 360 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF41P51814 821 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 GAS1P54826 345 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 SUMO3P55854 103 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 DSCR4P56555 118 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 KCNJ10P78508 379 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ADORA2A-AS1P86434 159 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 SLC25A3Q00325 362 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 CBFBQ13951 182 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 FGFBP1Q14512 234 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 DNAL1Q4LDG9 190 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 RPS26P11Q5JNZ5 115 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF324BQ6AW86 544 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 OR5M10Q6IEU7 315 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 MTFR2Q6P444 385 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 XKRXQ6PP77 449 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 APOOLQ6UXV4 268 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 OLIG3Q7RTU3 272 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 PTOV1Q86YD1 416 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ARMC8Q8IUR7 673 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF440Q8IYI8 595 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 MICU2Q8IYU8 434 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 C10orf111Q8N326 155 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 TMEM251Q8N6I4 163 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 TMCO5AQ8N6Q1 288 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 WDSUB1Q8N9V3 476 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 RBM15BQ8NDT2 890 aaKnown RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 NR4A3Q92570 626 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 SH3YL1Q96HL8 342 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF583Q96ND8 569 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 TAAR6Q96RI8 345 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 CDRT15Q96T59 188 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 C1orf21Q9H246 121 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 DSN1Q9H410 356 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 LDAHQ9H6V9 325 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 EXO5Q9H790 373 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF703Q9H7S9 590 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 EVA1AQ9H8M9 152 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 MCCC2Q9HCC0 563 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 TMEM181Q9P2C4 612 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ABCD2Q9UBJ2 740 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 PRDM4Q9UKN5 801 aa9.59□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF443Q9Y2A4 671 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-204ENST00000405578 NPIPA5E9PKD4 350 aa9.58□□□□□ -0.88
RPAIN-204ENST00000405578 M0QX08 132 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms