RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CTPS2Q9NRF8 586 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 IGHV1-45A0A0A0MS14 117 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 A0A1W2PQ72 361 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 OR6C70A6NIJ9 312 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 BCKDKO14874 412 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 GKN3PP0CG01 181 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 TCN2P20062 427 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 RPS15P62841 145 aaKnown RBP19.29■□□□□ 0.68
TPM1-208ENST00000404484 HOXC5Q00444 222 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 EFR3AQ14156 821 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 SEC23BQ15437 767 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 RRM2BQ7LG56 351 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 TSPYL5Q86VY4 417 aaPredicted RBP19.29■□□□□ 0.68
TPM1-208ENST00000404484 CT55Q8WUE5 264 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 GRIP2Q9C0E4 1043 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 PRORYQ9H606 182 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 KRCC1Q9NPI7 259 aaPredicted RBP19.29■□□□□ 0.68
TPM1-208ENST00000404484 HS3ST3B1Q9Y662 390 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 FAM208BQ5VWN6 2430 aa19.29■□□□□ 0.68
TPM1-208ENST00000404484 CDC14CA4D256 554 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 PRKNO60260 465 aaPredicted RBP19.28■□□□□ 0.68
TPM1-208ENST00000404484 CYP4B1P13584 511 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 PRG2P13727 222 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 NAGAP17050 411 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 FOXD4Q12950 439 aaPredicted RBP19.28■□□□□ 0.68
TPM1-208ENST00000404484 NPRL3Q12980 569 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 OR1Q1Q15612 314 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 GDF7Q7Z4P5 450 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 VASH2Q86V25 355 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 PRR22Q8IZ63 422 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 OR4K5Q8NGD3 323 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 ACOT11Q8WXI4 607 aaPredicted RBP19.28■□□□□ 0.68
TPM1-208ENST00000404484 NACC2Q96BF6 587 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 EXOSC3Q9NQT5 275 aaKnown RBP19.28■□□□□ 0.68
TPM1-208ENST00000404484 RYDENQ9NUL5 291 aaKnown RBP19.28■□□□□ 0.68
TPM1-208ENST00000404484 SCOCQ9UIL1 159 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 TCFL5Q9UL49 500 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 LHX6Q9UPM6 363 aa19.28■□□□□ 0.68
TPM1-208ENST00000404484 A0A1W2PQD3 144 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 C21orf140B9A014 251 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 RAD1O60671 282 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 UBL4AP11441 157 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 COX6A1P12074 109 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 FUT4P22083 530 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 TMED10P49755 219 aaKnown RBP19.27■□□□□ 0.68
TPM1-208ENST00000404484 COX10Q12887 443 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 BTBD16Q32M84 506 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 PLAG1Q6DJT9 500 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 PGBD2Q6P3X8 592 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 ZNF730Q6ZMV8 503 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 THAP5Q7Z6K1 395 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 NLGN4XQ8N0W4 816 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 FAM71CQ8NEG0 241 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 NLGN4YQ8NFZ3 816 aaPredicted RBP19.27■□□□□ 0.68
TPM1-208ENST00000404484 M1APQ8TC57 530 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 GTPBP3Q969Y2 492 aaKnown RBP19.27■□□□□ 0.68
TPM1-208ENST00000404484 APOL4Q9BPW4 351 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 NIPSNAP1Q9BPW8 284 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 MESP1Q9BRJ9 268 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 PRR14Q9BWN1 585 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 GPR87Q9BY21 358 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 DEFB126Q9BYW3 111 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 UCK2Q9BZX2 261 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 ING2Q9H160 280 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 FARSAQ9Y285 508 aaKnown RBP19.27■□□□□ 0.68
TPM1-208ENST00000404484 NPFFR2Q9Y5X5 522 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 HSPE1-MOB4S4R3N1 261 aa19.27■□□□□ 0.68
TPM1-208ENST00000404484 ICOSLGO75144 302 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 PPM1BO75688 479 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 GASTP01350 101 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 GSTM3P21266 225 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 HTR2AP28223 471 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 RNF144AP50876 292 aaPredicted RBP19.27■□□□□ 0.67
TPM1-208ENST00000404484 UCNP55089 124 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 TMPRSS3P57727 454 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 ESRRGP62508 458 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 CXADRP78310 365 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 PLAURQ03405 335 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 FNDC7Q5VTL7 733 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 NDUFAF7Q7L592 441 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 IL22RA1Q8N6P7 574 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 LSMEM1Q8N8F7 131 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 PIGXQ8TBF5 258 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 SLC22A8Q8TCC7 542 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 PHOSPHO1Q8TCT1 267 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 ELP5Q8TE02 316 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 MUS81Q96NY9 551 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 SELENONQ9NZV5 590 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 SLC7A7Q9UM01 511 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 GMPPBQ9Y5P6 360 aa19.27■□□□□ 0.67
TPM1-208ENST00000404484 A0A087WUU8 490 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 GTPBP1O00178 669 aaKnown RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 BCAS1O75363 584 aaPredicted RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 CLIC3O95833 236 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 WT1P19544 449 aaPredicted RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 CLK3P49761 638 aaKnown RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 COPZ1P61923 177 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 SSPNQ14714 243 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 ZNF691Q5VV52 312 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 CD300LDQ6UXZ3 194 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms