RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SIRPAP78324 504 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 HPCAP84074 193 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 CHRNEQ04844 493 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 ZNF141Q15928 474 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 SYPL1Q16563 259 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 C6orf10Q5SRN2 563 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 FRRS1Q6ZNA5 592 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 ZZZ3Q8IYH5 903 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 ATP6V1C2Q8NEY4 427 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 ZG16BQ96DA0 208 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 ZNF559Q9BR84 538 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 ZNF446Q9NWS9 450 aa16.34■□□□□ 0.21
PTPRN2-204ENST00000404321 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 A0A1W2PNV4 684 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 FAM234BA2RU67 622 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 C7orf72A4D263 438 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 TNFSF11O14788 317 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 CXCL13O43927 109 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 BCAS1O75363 584 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 TNFSF13O75888 250 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 AQP8O94778 261 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 H6PDO95479 791 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 IL18BPO95998 194 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 CSTAP01040 98 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 ME2P23368 584 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 SHC1P29353 583 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 SFTPDP35247 375 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 SLC6A8P48029 635 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 SUMO3P55854 103 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 RPS3AP61247 264 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 LRRC74AQ0VAA2 488 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 CTU2Q2VPK5 515 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 SLC2A7Q6PXP3 512 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 LILRA2Q8N149 483 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 METTL25Q8N6Q8 603 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 TOR1AIP2Q8NFQ8 470 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 OR10D3Q8NH80 312 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 GPR119Q8TDV5 335 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 C14orf79Q96F83 325 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 AURKBQ96GD4 344 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 ITCHQ96J02 903 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 LURAP1Q96LR2 239 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 MAGEB18Q96M61 343 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 ZFP3Q96NJ6 502 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 RMND5AQ9H871 391 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 STOML1Q9UBI4 398 aa16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 INTS1Q8N201 2190 aaKnown RBP16.33■□□□□ 0.2
PTPRN2-204ENST00000404321 EFNA2O43921 213 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 EIF4E2O60573 245 aaKnown RBP16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 SMNDC1O75940 238 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 CHRM4P08173 479 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 KIR2DL3P43628 341 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 CPA2P48052 419 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 RAC1P63000 192 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 SKP2Q13309 424 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 QPRTQ15274 297 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 FBXL19-AS1Q494R0 122 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 VWA1Q6PCB0 445 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 ZNF619Q8N2I2 560 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 OR5W2Q8NH69 310 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 ZFP90Q8TF47 636 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 LRRC46Q96FV0 321 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 CCDC28BQ9BUN5 200 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 THUMPD3Q9BV44 507 aaKnown RBP16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 RBM24Q9BX46 236 aaKnown RBP16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 PRRG4Q9BZD6 226 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 JKAMPQ9P055 326 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 KCNN3Q9UGI6 736 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 APCP25054 2843 aa16.32■□□□□ 0.2
PTPRN2-204ENST00000404321 PCNX3Q9H6A9 2034 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 ARHGAP21Q5T5U3 1957 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 A0A0J9YW62 118 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 NR5A2O00482 541 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 KRT75O95678 551 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 NR2F1P10589 423 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 ETFAP13804 333 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 PRKCAP17252 672 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CPOXP36551 454 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 EIF1P41567 113 aaKnown RBP16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CRATP43155 626 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CBFBQ13951 182 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 HBMQ6B0K9 141 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 OR2A2Q6IF42 318 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 EIF3MQ7L2H7 374 aaKnown RBP16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 LSRQ86X29 649 aaPredicted RBP16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 OR2V1Q8NHB1 315 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 ADGRG7Q96K78 797 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 LAT2Q9GZY6 243 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 RNF122Q9H9V4 155 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 MCCC2Q9HCC0 563 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CRIM1Q9NZV1 1036 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 PACSIN3Q9UKS6 424 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CLEC4AQ9UMR7 237 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 ZNF175Q9Y473 711 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 LRBAP50851 2863 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 DCHS2Q6V1P9 2916 aa16.31■□□□□ 0.2
PTPRN2-204ENST00000404321 CSMD1Q96PZ7 3565 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms