RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 P2RX1P51575 399 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 RPUSD3Q6P087 351 aaKnown RBP30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 EID3Q8N140 333 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 FAM86B1Q8N7N1 296 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 PROX1Q92786 737 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 LRGUKQ96M69 825 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 RNF145Q96MT1 663 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 HHATLQ9HCP6 504 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 EXOSC3Q9NQT5 275 aaKnown RBP30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 SAMD4AQ9UPU9 718 aaKnown RBP30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 IGSF10Q6WRI0 2623 aa30.3■■■□□ 2.44
CSNK1E-204ENST00000403904 ANKRD65E5RJM6 399 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 SYT5O00445 386 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 C8BP07358 591 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 MSX1P28360 303 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 RYKP34925 604 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 KLRB1Q12918 225 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 HSH2DQ96JZ2 352 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 TAAR6Q96RI8 345 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 C15orf41Q9Y2V0 281 aa30.29■■■□□ 2.44
CSNK1E-204ENST00000403904 FAM166BA8MTA8 275 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 M0R3H8 397 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 CBR3O75828 277 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 PRKD3O94806 890 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 GLSO94925 669 aaPredicted RBP30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 FREM3P0C091 2139 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 PRG2P13727 222 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 RNFT1Q5M7Z0 435 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 ENPP6Q6UWR7 440 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 OR5W2Q8NH69 310 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 UBL7Q96S82 380 aaPredicted RBP30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 OLAHQ9NV23 265 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 NUDT14O95848 222 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 NQO1P15559 274 aaKnown RBP30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 HOXC5Q00444 222 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 C1orf146Q5VVC0 180 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 FKBP9P1Q75LS8 142 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 LACC1Q8IV20 430 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 TOR1AIP2Q8NFQ8 470 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 VANGL1Q8TAA9 524 aaPredicted RBP30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 ARHGDIGQ99819 225 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 PTGES2Q9H7Z7 377 aa30.28■■■□□ 2.44
CSNK1E-204ENST00000403904 CDC40O60508 579 aaKnown RBP eCLIP30.27■■■□□ 2.442e-7■■□□□ 14
CSNK1E-204ENST00000403904 CIB2O75838 187 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 OR1E2P47887 323 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 ERFP50548 548 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 PPIAP62937 165 aaKnown RBP30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 MTX3Q5HYI7 312 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 TMEM251Q8N6I4 163 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 OR4D11Q8NGI4 311 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 RAB3IPQ96QF0 476 aaPredicted RBP30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 UBQLN3Q9H347 655 aa30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 ZNF703Q9H7S9 590 aaPredicted RBP30.27■■■□□ 2.44
CSNK1E-204ENST00000403904 KMT2BQ9UMN6 2715 aaPredicted RBP30.26■■■□□ 2.44
CSNK1E-204ENST00000403904 TCRBV5S2A0A599 114 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 CFAP73A6NFT4 308 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 AP3D1O14617 1153 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 GDF1P27539 372 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 RGS8P57771 180 aaPredicted RBP30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 CBFBQ13951 182 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 TOMM20Q15388 145 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 NRF1Q16656 503 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 HYAL4Q2M3T9 481 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 ARSKQ6UWY0 536 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 RBM45Q8IUH3 476 aaKnown RBP30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 ZNF440Q8IYI8 595 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 TRIM15Q9C019 465 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 B4GALT7Q9UBV7 327 aa30.26■■■□□ 2.43
CSNK1E-204ENST00000403904 ANKUB1A6NFN9 424 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 ACAA2P42765 397 aaKnown RBP30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 MAGEA5P43359 124 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 TOMM34Q15785 309 aaPredicted RBP30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 INAQ16352 499 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 ZNF550Q7Z398 422 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 SLC22A16Q86VW1 577 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 CARM1Q86X55 608 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 OR6T1Q8NGN1 323 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 GPR119Q8TDV5 335 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 ZNF524Q96C55 264 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 PYURFQ96I23 114 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 VDAC3Q9Y277 283 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 SLC9A8Q9Y2E8 581 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 SPTA1P02549 2419 aa30.25■■■□□ 2.43
CSNK1E-204ENST00000403904 LINGO3P0C6S8 592 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 ZNF24P17028 368 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 ZNF136P52737 540 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 SUMO3P55854 103 aaPredicted RBP30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 EPS8Q12929 822 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 SLC35B4Q969S0 331 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 C1GALT1C1Q96EU7 318 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 PRR14Q9BWN1 585 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 ACOT7O00154 380 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 ATXN7O15265 892 aaPredicted RBP30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 TRAPPC6AO75865 159 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 TCEA1P23193 301 aaKnown RBP30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 DPP4P27487 766 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 SLC6A8P48029 635 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 IFI44LQ53G44 452 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 SPATA24Q86W54 205 aa30.24■■■□□ 2.43
CSNK1E-204ENST00000403904 TPST2O60704 377 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms