RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TRIB1Q96RU8 372 aa17.33■□□□□ 0.37
RTN4-207ENST00000402434 QRSL1Q9H0R6 528 aaKnown RBP17.33■□□□□ 0.37
RTN4-207ENST00000402434 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.37
RTN4-207ENST00000402434 SLC35A3Q9Y2D2 325 aa17.33■□□□□ 0.37
RTN4-207ENST00000402434 NDUFAF1Q9Y375 327 aa17.33■□□□□ 0.37
RTN4-207ENST00000402434 DSPPQ9NZW4 1301 aa17.33■□□□□ 0.36
RTN4-207ENST00000402434 SHISA8B8ZZ34 492 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 ETV2O00321 342 aaPredicted RBP17.32■□□□□ 0.36
RTN4-207ENST00000402434 SNRPB2P08579 225 aaKnown RBP17.32■□□□□ 0.36
RTN4-207ENST00000402434 RPS4Y1P22090 263 aaKnown RBP17.32■□□□□ 0.36
RTN4-207ENST00000402434 PPIBP23284 216 aaKnown RBP17.32■□□□□ 0.36
RTN4-207ENST00000402434 ADH6P28332 368 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 HTR1EP28566 365 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 PGM1P36871 562 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 SUCLG1P53597 346 aaKnown RBP17.32■□□□□ 0.36
RTN4-207ENST00000402434 KCNJ10P78508 379 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 RETREG3Q86VR2 466 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 TNIP2Q8NFZ5 429 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 ZNF524Q96C55 264 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 SAR1AQ9NR31 198 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 CALML5Q9NZT1 146 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 CLCF1Q9UBD9 225 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 STOML1Q9UBI4 398 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 GPC6Q9Y625 555 aaPredicted RBP17.32■□□□□ 0.36
RTN4-207ENST00000402434 KIAA1549Q9HCM3 1950 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 DOCK7Q96N67 2140 aa17.32■□□□□ 0.36
RTN4-207ENST00000402434 CLCA1A8K7I4 914 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 HSPB2A8KAH6 182 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 PRSS44E7EML9 344 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 H3BML4 177 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 NTN1O95631 604 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 NUDT14O95848 222 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 GPX2P18283 190 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 COL8A1P27658 744 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 CRISP3P54108 245 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 EEFSECP57772 596 aaKnown RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 RAC1P63000 192 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 SF3A3Q12874 501 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTN4-207ENST00000402434 TOMM34Q15785 309 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 HSPB2Q16082 182 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 HIST2H2BCQ6DN03 193 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 UBQLNLQ8IYU4 475 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 MEIOBQ8N635 442 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 C10orf82Q8WW14 230 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 WNT2BQ93097 391 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 RNF145Q96MT1 663 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 TREX2Q9BQ50 279 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 A4GALTQ9NPC4 353 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 CHST11Q9NPF2 352 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 H0YC42 278 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 ANGPT2O15123 496 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 BCAS1O75363 584 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 IL2RAP01589 272 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 BCHEP06276 602 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 NUDT7P0C024 238 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 UBTFL6P0CB48 400 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 PRKCAP17252 672 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 GRNP28799 593 aaKnown RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 ADSLP30566 484 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 TPD52P55327 224 aaPredicted RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 CLDN20P56880 219 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 PLAURQ03405 335 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 CBFBQ13951 182 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 GNA13Q14344 377 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 SLC25A53Q5H9E4 307 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 PRAMEF8Q5VWM4 474 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 PRAMEF7Q5VXH5 474 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 LIX1LQ8IVB5 337 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 CMIPQ8IY22 773 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 NAXEQ8NCW5 288 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 IKZF5Q9H5V7 419 aa17.31■□□□□ 0.36
RTN4-207ENST00000402434 EXOSC3Q9NQT5 275 aaKnown RBP17.31■□□□□ 0.36
RTN4-207ENST00000402434 INTS1Q8N201 2190 aaKnown RBP17.3■□□□□ 0.36
RTN4-207ENST00000402434 CENPEQ02224 2701 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 UNC79Q9P2D8 2635 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 CLDN24A6NM45 220 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 EFNA2O43921 213 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 NID1P14543 1247 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 KLF10Q13118 480 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 RUNDC3AQ59EK9 446 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 SP5Q6BEB4 398 aaPredicted RBP17.3■□□□□ 0.36
RTN4-207ENST00000402434 POMZP3Q6PJE2 187 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 HMGN2P46Q86SG4 172 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 GGNQ86UU5 652 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 C10orf111Q8N326 155 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 TMCO5AQ8N6Q1 288 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 METTL25Q8N6Q8 603 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 C9orf106Q8NAJ2 232 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 TMEM19Q96HH6 336 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 MRGPRX4Q96LA9 322 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 THUMPD3Q9BV44 507 aaKnown RBP17.3■□□□□ 0.36
RTN4-207ENST00000402434 BCL2L10Q9HD36 194 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 ZNF629Q9UEG4 869 aaPredicted RBP17.3■□□□□ 0.36
RTN4-207ENST00000402434 CORO2BQ9UQ03 480 aa17.3■□□□□ 0.36
RTN4-207ENST00000402434 ADGRG4Q8IZF6 3080 aa17.29■□□□□ 0.36
RTN4-207ENST00000402434 PKDREJQ9NTG1 2253 aa17.29■□□□□ 0.36
RTN4-207ENST00000402434 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.29■□□□□ 0.36
RTN4-207ENST00000402434 A0A0G2JPF8 293 aa17.29■□□□□ 0.36
RTN4-207ENST00000402434 TMEM247A6NEH6 219 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms