RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PFN4Q8NHR9 129 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 RNF217Q8TC41 542 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 TP53INP1Q96A56 240 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 VMP1Q96GC9 406 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 STRADBQ9C0K7 418 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 POLR1BQ9H9Y6 1135 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 C19orf25Q9UFG5 118 aaPredicted RBP23.53■■□□□ 1.36
CPNE1-205ENST00000401607 ISXQ2M1V0 245 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 OR8D4Q8NGM9 314 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 PHOSPHO1Q8TCT1 267 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 CDC6Q99741 560 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 CDC42EP2O14613 210 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 UBL4AP11441 157 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 STAT5AP42229 794 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 PNLIPRP2P54317 469 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 SLC26A5P58743 744 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 CDK5Q00535 292 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 SKP2Q13309 424 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 NCF4Q15080 339 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 DCAF12Q5T6F0 453 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 XAF1Q6GPH4 301 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 C16orf47Q6ZP98 133 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-205ENST00000401607 ZNF440Q8IYI8 595 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 CADM2Q8N3J6 435 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 NUBPLQ8TB37 319 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 NODALQ96S42 347 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 ZNF426Q9BUY5 554 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 RTN4RQ9BZR6 473 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 PARD6AQ9NPB6 346 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 C20orf141Q9NUB4 165 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 PLCXD1Q9NUJ7 323 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 ERVK-18Q9QC07 812 aa23.52■■□□□ 1.36
CPNE1-205ENST00000401607 C9J4A7 227 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 MPZL2O60487 215 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 KLF7O75840 302 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-205ENST00000401607 UMODP07911 640 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 GIPRP48546 466 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 RAB15P59190 212 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 CSNK2BP67870 215 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 PRKCDQ05655 676 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 GINS1Q14691 196 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 NEDD8Q15843 81 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 ALG10BQ5I7T1 473 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 PTCHD4Q6ZW05 846 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 RAB11FIP2Q7L804 512 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 ZNF540Q8NDQ6 660 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 SLC25A19Q9HC21 320 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 KRCC1Q9NPI7 259 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-205ENST00000401607 EXOSC3Q9NQT5 275 aaKnown RBP23.51■■□□□ 1.35
CPNE1-205ENST00000401607 TOR4AQ9NXH8 423 aa23.51■■□□□ 1.35
CPNE1-205ENST00000401607 LOC102723996A0A087X1L8 192 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 TRBV11-1A0A0K0K1C0 115 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 TMEM200CA6NKL6 621 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 JUNBP17275 347 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 PMS2P3Q13401 168 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 ACSM5Q6NUN0 579 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 BORAQ6PGQ7 559 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 CBLN3Q6UW01 205 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 LINC00114Q6XXX2 140 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 WDR36Q8NI36 951 aaKnown RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 MEPEQ9NQ76 525 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 CARD8Q9Y2G2 431 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 TNFRSF10AO00220 468 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 KPNA4O00629 521 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 ZNF354AO60765 605 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 NGFRP08138 427 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 MAKP20794 623 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 SNRPGP62308 76 aaKnown RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 PSPHP78330 225 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 CSRP2Q16527 193 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 ULK3Q6PHR2 472 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 CASP12Q6UXS9 341 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 TEX47Q8TBZ9 253 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 LIN37Q96GY3 246 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 MPP4Q96JB8 637 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 HS6ST2Q96MM7 605 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 SIGLEC11Q96RL6 698 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 ATP13A2Q9NQ11 1180 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 MED31Q9Y3C7 131 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 PTRH2Q9Y3E5 179 aaKnown RBP23.5■■□□□ 1.35
CPNE1-205ENST00000401607 CEPT1Q9Y6K0 416 aa23.5■■□□□ 1.35
CPNE1-205ENST00000401607 A0A1W2PQD3 144 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 TMX2-CTNND1H3BSU7 103 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 ZNF264O43296 627 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 CSO75390 466 aaKnown RBP23.49■■□□□ 1.35
CPNE1-205ENST00000401607 STK17BO94768 372 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 IFI30P13284 250 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 NUDT6P53370 316 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 TCF15Q12870 199 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 ZNF620Q6ZNG0 422 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 OR8K3Q8NH51 312 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 THAP3Q8WTV1 239 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-205ENST00000401607 IPCEF1Q8WWN9 437 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-205ENST00000401607 IL4I1Q96RQ9 567 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 DPH1Q9BZG8 443 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 IL20Q9NYY1 176 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 PISDQ9UG56 409 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 PSORS1C1Q9UIG5 152 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 SNX5Q9Y5X3 404 aa23.49■■□□□ 1.35
CPNE1-205ENST00000401607 ALG1L2C9J202 215 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms