RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ZNF681Q96N22 645 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 NEDD4LQ96PU5 975 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 ARHGAP9Q9BRR9 750 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 ACTRT3Q9BYD9 372 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 OR2B2Q9GZK3 357 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 LRRN3Q9H3W5 708 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 TIGARQ9NQ88 270 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 SNX7Q9UNH6 387 aa14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 RBMX2Q9Y388 322 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-203ENST00000401522 CPSF4LA6NMK7 179 aaKnown RBP14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 A8MU76 341 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 RGS13O14921 159 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 GFRA3O60609 400 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 LIMS3P0CW19 117 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 LIMS4P0CW20 117 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 GAAP10253 952 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 HOXB3P14651 431 aaPredicted RBP14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 NKX2-5P52952 324 aaPredicted RBP14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 CDH11P55287 796 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 ATAD3CQ5T2N8 411 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 PDZK1Q5T2W1 519 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 NXNL2Q5VZ03 156 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 USP53Q70EK8 1073 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 VRK2Q86Y07 508 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 CARFQ8N187 725 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 POGLUT1Q8NBL1 392 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 TOR1AIP2Q8NFQ8 470 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 OR9A2Q8NGT5 310 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 ACOT11Q8WXI4 607 aaPredicted RBP14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 DIRAS2Q96HU8 199 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 FAM46AQ96IP4 442 aaKnown RBP14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 CD180Q99467 661 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 DPYSL5Q9BPU6 564 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 KATNB1Q9BVA0 655 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 CNIH4Q9P003 139 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 GPR52Q9Y2T5 361 aa14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 GPR55Q9Y2T6 319 aaPredicted RBP14.77□□□□□ -0.04
CHRFAM7A-203ENST00000401522 TRDV1A0A1B0GX56 115 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 AP3D1O14617 1153 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 OR5F1O95221 314 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 APOL3O95236 402 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 AGR2O95994 175 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 CSF2RBP32927 897 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 DDOSTP39656 456 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 LSSP48449 732 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 PPM1FP49593 454 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 DSG2Q14126 1118 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 ZNF425Q6IV72 752 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TMEM71Q6P5X7 295 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 GLRX5Q86SX6 157 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 MEX3DQ86XN8 651 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 ZNF485Q8NCK3 441 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 CAPSLQ8WWF8 208 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 SEMA6CQ9H3T2 930 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 EQTNQ9NQ60 294 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 YARS2Q9Y2Z4 477 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 A0A0J9YY10 115 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 DUXAA6NLW8 204 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 NTN3O00634 580 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 POLR1CO15160 346 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 SURF4O15260 269 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 CHST10O43529 356 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TMCC2O75069 709 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 SLC1A3P43003 542 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 GFERP55789 205 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 RGS8P57771 180 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 RAB8AP61006 207 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 PPP3R1P63098 170 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 IFITM2Q01629 132 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 MAP4K2Q12851 820 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 FAM214AQ32MH5 1076 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 ZNF628Q5EBL2 1059 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 AADACL4Q5VUY2 407 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 HEPHL1Q6MZM0 1159 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 PLEKHM3Q6ZWE6 761 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 OR52P1PQ8NH57 321 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 GIMAP5Q96F15 307 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TGM7Q96PF1 710 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 SNX18Q96RF0 628 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 NUDT22Q9BRQ3 303 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 PRR14Q9BWN1 585 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 SYNDIG1Q9H7V2 258 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 CACYBPQ9HB71 228 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TOR4AQ9NXH8 423 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 IL20Q9NYY1 176 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 SEMA5BQ9P283 1151 aa14.76□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TLCD2A6NGC4 264 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 HMX3A6NHT5 357 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TM4SF5O14894 197 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 KLF4O43474 513 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 FRS3O43559 492 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 IDH3BO43837 385 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 CSF3P09919 207 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 S100A1P23297 94 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 TRHRP34981 398 aaPredicted RBP14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 AVPR1BP47901 424 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 FABP5Q01469 135 aa14.75□□□□□ -0.05
CHRFAM7A-203ENST00000401522 ACSM1Q08AH1 577 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms