RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FASLGP48023 281 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 SLC38A5Q8WUX1 472 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 INTS14Q96SY0 518 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 CD93Q9NPY3 652 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 UBQLN4Q9NRR5 601 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 MRPL2Q5T653 305 aaKnown RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 SLC22A10Q63ZE4 541 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 WDR83Q9BRX9 315 aaKnown RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 DUSP23Q9BVJ7 150 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 CNOT2Q9NZN8 540 aaKnown RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 TRBV4-1A0A0J9YWV2 114 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 C7orf72A4D263 438 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 TAPBPO15533 448 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 PGFP49763 221 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 ACSM3Q53FZ2 586 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 UNQ6126/PRO20091Q6UXV3 157 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 ADAMTSL4Q6UY14 1074 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 NCCRP1Q6ZVX7 275 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 BORCS7-ASMTA0A0B4J1R7 106 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF701M0R085 212 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 CCSMST1Q4G0I0 132 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF709Q8N972 641 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 GGHQ92820 318 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 C4orf36Q96KX1 117 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 HDAC8Q9BY41 377 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 OR2B2Q9GZK3 357 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 SRPX2O60687 465 aaPredicted RBP17.02■□□□□ 0.32
COL18A1-204ENST00000400337 BPNT1O95861 308 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 SSTR4P31391 388 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 PRSS3P35030 304 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 IRS1P35568 1242 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 TNFRSF17Q02223 184 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM207Q6UWW9 146 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF704Q6ZNC4 412 aaPredicted RBP17.02■□□□□ 0.32
COL18A1-204ENST00000400337 SPTSSAQ969W0 71 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 NECAB3Q96P71 396 aaPredicted RBP17.02■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF160Q9HCG1 818 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 RABL2AQ9UBK7 228 aaPredicted RBP17.02■□□□□ 0.32
COL18A1-204ENST00000400337 RABL2BQ9UNT1 228 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 ITGB4P16144 1822 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 FURINP09958 794 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 ARNTP27540 789 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 GIPRP48546 466 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 RGS6P49758 472 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 EGLN3Q9H6Z9 239 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 THAP10Q9P2Z0 257 aaPredicted RBP17.02■□□□□ 0.32
COL18A1-204ENST00000400337 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF337Q9Y3M9 751 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 CEPT1Q9Y6K0 416 aa17.02■□□□□ 0.32
COL18A1-204ENST00000400337 TRBV11-1A0A0K0K1C0 115 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 ZP2Q05996 745 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 WBP2NLQ6ICG8 309 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 CD300LFQ8TDQ1 290 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 RADILQ96JH8 1075 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 TM7SF3Q9NS93 570 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF226Q9NYT6 803 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 CHMP24386 653 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 CSNK1EP49674 416 aaKnown RBP17.02■□□□□ 0.31
COL18A1-204ENST00000400337 PCGF3Q3KNV8 242 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 OR51Q1Q8NH59 317 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 TCTN2Q96GX1 697 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 TAS2R3Q9NYW6 316 aa17.02■□□□□ 0.31
COL18A1-204ENST00000400337 MYO10Q9HD67 2058 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 HMX2A2RU54 273 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 CENPBD1B2RD01 187 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 HTR3BO95264 441 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 POLR2IP36954 125 aaKnown RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 SMAD2Q15796 467 aaKnown RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 VN1R2Q8NFZ6 395 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 OR4F15Q8NGB8 312 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF417Q8TAU3 575 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 ISL2Q96A47 359 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 FOXN4Q96NZ1 517 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 MS4A8Q9BY19 250 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 A6NL46 340 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 BCAT2O15382 392 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 AQP9O43315 295 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 SLC16A7O60669 478 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 GASTP01350 101 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 NKPD1Q17RQ9 610 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 C18orf63Q68DL7 685 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 TLDC1Q6P9B6 456 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 FAM111BQ6SJ93 734 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 MEPCEQ7L2J0 689 aaKnown RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 LILRA2Q8N149 483 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 C19orf47Q8N9M1 422 aaKnown RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 SLC6A17Q9H1V8 727 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 KRBA1A5PL33 1030 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 TRIM64A6NGJ6 449 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 ANKRD28O15084 1053 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 SLCO2B1O94956 709 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 MPIG6BO95866 241 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 RPS5P46782 204 aaKnown RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 NKX2-5P52952 324 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 PPP1R3BQ86XI6 285 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 OR5H2Q8NGV7 314 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 ZFP90Q8TF47 636 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 DPCDQ9BVM2 203 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms