RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SLC30A2Q9BRI3 323 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 ELL3Q9HB65 397 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 MRPS2Q9Y399 296 aaKnown RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 A0A1W2PRG6 482 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 FMO6PO60774 539 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 RCVRNP35243 200 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 OMPP47874 163 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 C21orf58P58505 322 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF836Q6ZNA1 936 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 UBE3DQ7Z6J8 389 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 SDR9C7Q8NEX9 313 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 TMEM163Q8TC26 289 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 BAIAP2Q9UQB8 552 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 WWP2O00308 870 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ARL6IP5O75915 188 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 CD8BP10966 210 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 NID1P14543 1247 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 EIF1AXP47813 144 aaKnown RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 VWA2Q5GFL6 755 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 LEG1Q6P5S2 330 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 MBOAT2Q6ZWT7 520 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 OR4F15Q8NGB8 312 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TMEFF2Q9UIK5 374 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SERINC4A6NH21 518 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ANXA2P2A6NMY6 339 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 PTHP01270 115 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ANXA2P07355 339 aaKnown RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 GNALP38405 381 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ARFIP1P53367 373 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SLC35A2P78381 396 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SPCS2Q15005 226 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 PCM1Q15154 2024 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 RASSF6Q6ZTQ3 369 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ANKRD13BQ86YJ7 626 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 CCDC74AQ96AQ1 378 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 NKIRAS2Q9NYR9 191 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ABI3Q9P2A4 366 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 STUB1Q9UNE7 303 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 VDAC3Q9Y277 283 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TBX19O60806 448 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 PNMTP11086 282 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 CHRNB1P11230 501 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 PRKCAP17252 672 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TRHRP34981 398 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SLC15A1P46059 708 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TAS2R43P59537 309 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ERVK-25P63136 954 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 DNM1P34Q6PK57 102 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 KRT77Q7Z794 578 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 LRRC56Q8IYG6 542 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 NSMAFQ92636 917 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 HPS1Q92902 700 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 RBP7Q96R05 134 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SLC38A1Q9H2H9 487 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 DSN1Q9H410 356 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 FAM60AQ9NP50 221 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 TIGARQ9NQ88 270 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 SIRT5Q9NXA8 310 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 EP300Q09472 2414 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF24P17028 368 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ACTC1P68032 377 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ACTA1P68133 377 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 DNASE1L3Q13609 305 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ARHGAP11BQ3KRB8 267 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 OR2G6Q5TZ20 316 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 PAMR1Q6UXH9 720 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 GPALPP1Q8IXQ4 340 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 STACQ99469 402 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 PTRH2Q9Y3E5 179 aaKnown RBP13.03□□□□□ -0.32
SCAF4-202ENST00000399804 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
SCAF4-202ENST00000399804 OTX2P32243 289 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 OPRL1P41146 370 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 SOX2P48431 317 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 RAB40BQ12829 278 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 CCINQ13939 588 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 ZIC1Q15915 447 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 MPEG1Q2M385 716 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 GFOD2Q3B7J2 385 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 ALG10Q5BKT4 473 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 SLX4IPQ5VYV7 408 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 FAHD1Q6P587 224 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 CCDC80Q76M96 950 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 THAP4Q8WY91 577 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 PRDM9Q9NQV7 894 aa13.02□□□□□ -0.32
SCAF4-202ENST00000399804 ZFC3H1O60293 1989 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms