RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 GPR119Q8TDV5 335 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MARVELD3Q96A59 401 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZBTB8AQ96BR9 441 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TRNT1Q96Q11 434 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC38A1Q9H2H9 487 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NPDC1Q9NQX5 325 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC25A37Q9NYZ2 338 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NAV2Q8IVL1 2488 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HNRNPRO43390 633 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CSTAP01040 98 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 VIMP08670 466 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NR2F1P10589 423 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PRF1P14222 555 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF17P17021 662 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HPCAP84074 193 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FOXF1Q12946 379 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 GGNQ86UU5 652 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 GRAMD2AQ8IUY3 354 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RELL2Q8NC24 303 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 STON2Q8WXE9 905 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 INTS12Q96CB8 462 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF845Q96IR2 970 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PINK1Q9BXM7 581 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF385DQ9H6B1 395 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 AP4B1Q9Y6B7 739 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MAST4O15021 2626 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FBN2P35556 2912 aa12.69□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CSMD1Q96PZ7 3565 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 C7orf72A4D263 438 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CLIC1O00299 241 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EIF1AYO14602 144 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EFNA2O43921 213 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EIF4E2O60573 245 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 GUSBP08236 651 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NUDT7P0C024 238 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ANXA11P50995 505 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PLAURQ03405 335 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FGFBP1Q14512 234 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RGNQ15493 299 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LRRC74BQ6ZQY2 392 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EIF3MQ7L2H7 374 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CHMP1BQ7LBR1 199 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 OR5W2Q8NH69 310 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FBXO27Q8NI29 283 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC38A5Q8WUX1 472 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FIG4Q92562 907 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 WNT2BQ93097 391 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 UCN2Q96RP3 112 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SIKE1Q9BRV8 207 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 THUMPD3Q9BV44 507 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TRIM33Q9UPN9 1127 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HEATR5AQ86XA9 2040 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CSMD2Q7Z408 3487 aa12.68□□□□□ -0.38
HLA-DQB1-202ENST00000399079 A0A096LPI6 279 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 A0A1W2PP18 115 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC22A20A6NK97 555 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DVL2O14641 736 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ATP8B1O43520 1251 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RCBTB2O95199 551 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 BCHEP06276 602 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TFPTP0C1Z6 253 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMIGD3P0DMS9 266 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TROVE2P10155 538 aaKnown RBP eCLIP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 COX6B1P14854 86 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PRKCAP17252 672 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SHC1P29353 583 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PGM1P36871 562 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EIF1AXP47813 144 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SUMO3P55854 103 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DSTNP60981 165 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RAC1P63000 192 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 KCNJ10P78508 379 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TXNL4AP83876 142 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CBFBQ13951 182 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 QPRTQ15274 297 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CTU2Q2VPK5 515 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC25A35Q3KQZ1 300 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LRIF1Q5T3J3 769 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LSRQ86X29 649 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LILRA2Q8N149 483 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 C10orf111Q8N326 155 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TOR1AIP2Q8NFQ8 470 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FNDC9Q8TBE3 224 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MAL2Q969L2 176 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TM9SF2Q99805 663 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LAT2Q9GZY6 243 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MTHFD2LQ9H903 347 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMEM45AQ9NWC5 275 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 VAPAQ9P0L0 249 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 P2RX2Q9UBL9 471 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms