RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 E9PLD3 99 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 CXCL11O14625 94 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 TAPBPO15533 448 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 GPAA1O43292 621 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 IGHDP01880 384 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 THY1P04216 161 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 STSP08842 583 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 GPR89BP0CG08 455 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 HNF1AP20823 631 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ATP6V1C1P21283 382 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 UQCRC2P22695 453 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 IL2RGP31785 369 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 NF2P35240 595 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 MDH2P40926 338 aaKnown RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 PRPHP41219 470 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 MAGEA5P43359 124 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 RPL32P62910 135 aaKnown RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 MRPS11P82912 194 aaKnown RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 OC90Q02509 493 aaPredicted RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 ASAH1Q13510 395 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 QRICH1Q2TAL8 776 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 CCDC152Q4G0S7 254 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 CFAP157Q5JU67 520 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 OR8G2PQ6IF36 304 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ACSM5Q6NUN0 579 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 SYT10Q6XYQ8 523 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 APTXQ7Z2E3 356 aaKnown RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 LINC00612Q8N6U2 182 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 OR13F1Q8NGS4 319 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 CCDC26Q8TAB7 109 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 TRMT10AQ8TBZ6 339 aaKnown RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 PIGCQ92535 297 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 RPL3LQ92901 407 aaKnown RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 PELI1Q96FA3 418 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 SLC41A3Q96GZ6 507 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 VSIG2Q96IQ7 327 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 RIT2Q99578 217 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ZNF670Q9BS34 389 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 NIPSNAP3BQ9BS92 247 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 GLT8D2Q9H1C3 349 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 GLIPR2Q9H4G4 154 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 IKZF5Q9H5V7 419 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 GORASP2Q9H8Y8 452 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ZNF702PQ9H963 129 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ELOVL3Q9HB03 270 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 MIEF1Q9NQG6 463 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 SMOXQ9NWM0 555 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 VNN3Q9NY84 501 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 SIGLEC8Q9NYZ4 499 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 C6orf203Q9P0P8 240 aaPredicted RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 Q9UF83 564 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 TBK1Q9UHD2 729 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ZNF107Q9UII5 783 aaPredicted RBP2.03□□□□□ -2.08
CD47-203ENST00000398258 ANGPTL2Q9UKU9 493 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 SNX6Q9UNH7 406 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 SLCO1B1Q9Y6L6 691 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 ANKRD30BQ9BXX2 1392 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 RALGAPA1Q6GYQ0 2036 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 C15orf38-AP3S2A0A0A6YYH1 394 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 A0A1B0GWB2 263 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 CLRN2A0PK11 232 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 FAM168BA1KXE4 195 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ZNF705EA8MWA4 302 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 ARPC3O15145 178 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 GMFGO60234 142 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 SNNO75324 88 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 UGT2B17O75795 530 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 NOL4O94818 638 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 OPN1MWP04001 364 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 SLC35E2P0CK97 266 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 OPN1MW2P0DN77 364 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 OPN1MW3P0DN78 364 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ZNF44P15621 663 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 SERPINA2P20848 420 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 MMP11P24347 488 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 GDF1P27539 372 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 GRIA1P42261 906 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 KIR2DS2P43631 304 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 P2RY1P47900 373 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ACTR1AP61163 376 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 UBE2HP62256 183 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 MAP2K1Q02750 393 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 CD47Q08722 323 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ST3GAL3Q11203 375 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 IL24Q13007 206 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 GANABQ14697 944 aaKnown RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 PDK3Q15120 406 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 SLC15A2Q16348 729 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 LRRC23Q53EV4 343 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 CENPPQ6IPU0 288 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 FAM199XQ6PEV8 388 aaPredicted RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 BLOC1S2Q6QNY1 142 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 CXCL17Q6UXB2 119 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 NLRP9Q7RTR0 991 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 MOB3BQ86TA1 216 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ZCCHC7Q8N3Z6 543 aaKnown RBP2.02□□□□□ -2.09
CD47-203ENST00000398258 DHRSXQ8N5I4 330 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 ZNF525Q8N782 197 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 TRPV1Q8NER1 839 aa2.02□□□□□ -2.09
CD47-203ENST00000398258 OR4D5Q8NGN0 318 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms