RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SNAP29O95721 258 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 NDUFAF6Q330K2 333 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 FGD3Q5JSP0 725 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 JMJD6Q6NYC1 403 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 TMEM81Q6P7N7 255 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 PODNL1Q6PEZ8 512 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 OPN5Q6U736 354 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 PHOSPHO1Q8TCT1 267 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 PRSS27Q9BQR3 290 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 TBL1XR1Q9BZK7 514 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 CEP295Q9C0D2 2601 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 H0YAE9 185 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 MASP2O00187 686 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 NDUFB5O43674 189 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 MAN1A2O60476 641 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 IGFBP5P24593 272 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SOX3P41225 446 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 RAD23AP54725 363 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 GAS1P54826 345 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 MERTKQ12866 999 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 DCAF10Q5QP82 559 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 CBLN3Q6UW01 205 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 MARCH3Q86UD3 253 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 MISPQ8IVT2 679 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 GATSQ8NAP1 163 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ACOT11Q8WXI4 607 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 PSMF1Q92530 271 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SLC38A4Q969I6 547 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 NAF1Q96HR8 494 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ADI1Q9BV57 179 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 TMEM27Q9HBJ8 222 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ICAM5Q9UMF0 924 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 CHD8Q9HCK8 2581 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ACACBO00763 2458 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 A0A087WUU8 490 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 A0A1B0GWA3 101 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 TRABD2BA6NFA1 517 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ANGPTL1O95841 491 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SSR4P51571 173 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ADARB1P78563 741 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ZNF117Q03924 483 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SLC36A3Q495N2 470 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 C6orf52Q5T4I8 152 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SWT1Q5T5J6 900 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 CHERPQ8IWX8 916 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ATG16L2Q8NAA4 619 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 OR4K5Q8NGD3 323 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 OR9Q2Q8NGE9 314 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 NTNG2Q96CW9 530 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SECISBP2Q96T21 854 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 MBOAT4Q96T53 435 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 ZNF426Q9BUY5 554 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 DGCR6LQ9BY27 220 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 TOR3AQ9H497 397 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 CDCP1Q9H5V8 836 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 SLC7A7Q9UM01 511 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 CARD8Q9Y2G2 431 aa17.82■□□□□ 0.44
PDLIM2-205ENST00000397761 CNTRLQ7Z7A1 2325 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 E9PQ18 207 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 GTPBP1O00178 669 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 CHP2O43745 196 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 OR6B1O95007 311 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 ADAP00813 363 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 SLC6A8P48029 635 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 TBC1D25Q3MII6 688 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 PGBD2Q6P3X8 592 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 LINC00114Q6XXX2 140 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 NKAIN4Q8IVV8 208 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 APLFQ8IW19 511 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 PARP8Q8N3A8 854 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 DHRSXQ8N5I4 330 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 AQP11Q8NBQ7 271 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 OR10G3Q8NGC4 313 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 ANKRD60Q9BZ19 345 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 Q9H521 79 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 SH2D2AQ9NP31 389 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 KRT84Q9NSB2 600 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 KIF17Q9P2E2 1029 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 WASF3Q9UPY6 502 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 MGAT4BQ9UQ53 548 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 ORC6Q9Y5N6 252 aa17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 CHCHD2Q9Y6H1 151 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-205ENST00000397761 IGLV3-32A0A0A0MS00 114 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 MITFO75030 526 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 GASTP01350 101 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 ADRB1P08588 477 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 LINGO3P0C6S8 592 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 CAPGP40121 348 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 PTGDSP41222 190 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 CLK3P49761 638 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 CRTC2Q53ET0 693 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 C1orf94Q6P1W5 598 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 ULK3Q6PHR2 472 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 CD300LDQ6UXZ3 194 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 WDR88Q6ZMY6 472 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 USP51Q70EK9 711 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 MARVELD2Q8N4S9 558 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 OR5M3Q8NGP4 307 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 ASB15Q8WXK1 588 aa17.8■□□□□ 0.44
PDLIM2-205ENST00000397761 ARSGQ96EG1 525 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms