RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ACER2Q5QJU3 275 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF468Q5VIY5 522 aaPredicted RBP25.14■■□□□ 1.62
CPNE1-203ENST00000397442 BICRALQ6AI39 1079 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 ZNF770Q6IQ21 691 aaPredicted RBP25.14■■□□□ 1.62
CPNE1-203ENST00000397442 FAHD1Q6P587 224 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 IL20RBQ6UXL0 311 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 OR10G2Q8NGC3 310 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 PSD2Q9BQI7 771 aa25.14■■□□□ 1.62
CPNE1-203ENST00000397442 TMEFF2Q9UIK5 374 aaPredicted RBP25.14■■□□□ 1.62
CPNE1-203ENST00000397442 TRAPPC13A5PLN9 417 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 DAPP51397 102 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 DCST1Q5T197 706 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 PODNL1Q6PEZ8 512 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 ANKRD19PQ9H560 264 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 GALNT9Q9HCQ5 603 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 ICAM5Q9UMF0 924 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 SH3PXD2BA1X283 911 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 EIF4E2O60573 245 aaKnown RBP25.13■■□□□ 1.61
CPNE1-203ENST00000397442 NTN1O95631 604 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 ENDOUP21128 410 aaKnown RBP25.13■■□□□ 1.61
CPNE1-203ENST00000397442 TRAM2Q15035 370 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 ZNF613Q6PF04 617 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 NKAIN4Q8IVV8 208 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 OR9Q2Q8NGE9 314 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 THAP4Q8WY91 577 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 FGF11Q92914 225 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 ZNF524Q96C55 264 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 SH3YL1Q96HL8 342 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-203ENST00000397442 FEVQ99581 238 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 PRSS27Q9BQR3 290 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 TRIM2Q9C040 744 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 SH2D2AQ9NP31 389 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 SLC7A7Q9UM01 511 aa25.13■■□□□ 1.61
CPNE1-203ENST00000397442 SPTBN4Q9H254 2564 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 A0A0B4J2E0 115 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 A0A1B0GX12 115 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 ARRDC5A6NEK1 342 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 HCRTR2O43614 444 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 CCNB2O95067 398 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 THRBP10828 461 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 LSM11P83369 360 aaKnown RBP eCLIP25.12■■□□□ 1.61
CPNE1-203ENST00000397442 KDM4DQ6B0I6 523 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 LSRQ86X29 649 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-203ENST00000397442 DND1Q8IYX4 353 aaKnown RBP25.12■■□□□ 1.61
CPNE1-203ENST00000397442 TMEM156Q8N614 296 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 DUSP19Q8WTR2 217 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 TMEM27Q9HBJ8 222 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 TMCC3Q9ULS5 477 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 C15orf41Q9Y2V0 281 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 MSRB2Q9Y3D2 182 aa25.12■■□□□ 1.61
CPNE1-203ENST00000397442 PCNX3Q9H6A9 2034 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 A0A1B0GWA3 101 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 B4DXG7 233 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 FAAHO00519 579 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 PRKAR1AP10644 381 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 IFNA8P32881 189 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 CASP3P42574 277 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 CLK3P49761 638 aaKnown RBP25.11■■□□□ 1.61
CPNE1-203ENST00000397442 MEP1AQ16819 746 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 NHSL2Q5HYW2 709 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 MISPQ8IVT2 679 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 TMCO5AQ8N6Q1 288 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 CLEC1AQ8NC01 280 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 LHPPQ9H008 270 aa25.11■■□□□ 1.61
CPNE1-203ENST00000397442 A0A087WUU8 490 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 C2orf72A6NCS6 295 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 TP53I11O14683 189 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 TLX3O43711 291 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-203ENST00000397442 LINGO3P0C6S8 592 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 ITGA3P26006 1051 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 TMEM81Q6P7N7 255 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 WDR88Q6ZMY6 472 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 SECISBP2Q96T21 854 aaKnown RBP25.1■■□□□ 1.61
CPNE1-203ENST00000397442 SMPD3Q9NY59 655 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-203ENST00000397442 HRH3Q9Y5N1 445 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 CPAMD8Q8IZJ3 1885 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 ARGFXA6NJG6 315 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 SNAP29O95721 258 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 CBLP22681 906 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 MST1P26927 711 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 CCR4P51679 360 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 CRTC2Q53ET0 693 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-203ENST00000397442 BEST3Q8N1M1 668 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 PAQR8Q8TEZ7 354 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 NTNG2Q96CW9 530 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 METTL7AQ9H8H3 244 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 HPF1Q9NWY4 346 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 KLRF1Q9NZS2 232 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 EML6Q6ZMW3 1958 aa25.1■■□□□ 1.61
CPNE1-203ENST00000397442 MITFO75030 526 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-203ENST00000397442 C17orf67Q0P5P2 114 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 APLFQ8IW19 511 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-203ENST00000397442 CADM2Q8N3J6 435 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 ATG16L2Q8NAA4 619 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 TOR1AIP2Q8NFQ8 470 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 OR4K5Q8NGD3 323 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 OR5W2Q8NH69 310 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 TMEM255BQ8WV15 326 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 SLC38A4Q969I6 547 aa25.09■■□□□ 1.61
CPNE1-203ENST00000397442 EFSO43281 561 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms