RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LHX2P50458 406 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 DGKQP52824 942 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 SRYQ05066 204 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 TFF3Q07654 80 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 RCN1Q15293 331 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 C6orf120Q7Z4R8 191 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 TNIP2Q8NFZ5 429 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 OR4A15Q8NGL6 344 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 MBD3L2Q8NHZ7 208 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 LRRC58Q96CX6 371 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 OTUB1Q96FW1 271 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 OR52E6Q96RD3 313 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 UCN2Q96RP3 112 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 PIGQQ9BRB3 760 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 DOCK7Q96N67 2140 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 A0A087WZY1 265 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 RNF103-CHMP3A0A140T963 221 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 C17orf51A8MQB3 221 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 AK1P00568 194 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 HSD17B1P14061 328 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 ZNF708P17019 499 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 CAPN3P20807 821 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 MATN1P21941 496 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 UQCRC2P22695 453 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 VHLP40337 213 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 STARP49675 285 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 EEFSECP57772 596 aaKnown RBP13.17□□□□□ -0.3
SEC13-208ENST00000397109 B3GALT5-AS1P59052 145 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 BNIP2Q12982 314 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 CEACAM7Q14002 265 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 FLOT2Q14254 428 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 TIGD2Q4W5G0 525 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 DCST2Q5T1A1 773 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 RAET1LQ5VY80 246 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 CHMP1BQ7LBR1 199 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 ZAR1Q86SH2 424 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 ADGRE4PQ86SQ3 457 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 GALNT10Q86SR1 603 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 LIX1LQ8IVB5 337 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 OR5AK3PQ8NH89 298 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 LRRC46Q96FV0 321 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
SEC13-208ENST00000397109 ZFP3Q96NJ6 502 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 TUBA1CQ9BQE3 449 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 FBXO34Q9NWN3 711 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 ADA2Q9NZK5 511 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 LRRC42Q9Y546 428 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 CREBBPQ92793 2442 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 ADGRG4Q8IZF6 3080 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
SEC13-208ENST00000397109 H3BNH8 94 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 ACOT8O14734 319 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 KRT36O76013 467 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 PDE5AO76074 875 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 CPSF4O95639 269 aaKnown RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 AGR2O95994 175 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 ANPEPP15144 967 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 IGFBP2P18065 325 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 POU3F2P20265 443 aaPredicted RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 TCEA1P23193 301 aaKnown RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 CTSSP25774 331 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 SSTR2P30874 369 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 CLDN18P56856 261 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 CCNIQ14094 377 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 SWT1Q5T5J6 900 aaKnown RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 MEIOBQ8N635 442 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 MIPOL1Q8TD10 442 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 WNT2BQ93097 391 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 VPS33AQ96AX1 596 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 SLC35G5Q96KT7 338 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 RMND5AQ9H871 391 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 EXD2Q9NVH0 621 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 OR2M5A3KFT3 312 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 KDM4EB2RXH2 506 aaPredicted RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 IL18BPO95998 194 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 PRF1P14222 555 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 OPRM1P35372 400 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 ATP12AP54707 1039 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 ANKRD46Q86W74 232 aa13.16□□□□□ -0.3
SEC13-208ENST00000397109 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
SEC13-208ENST00000397109 GATSQ8NAP1 163 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms