RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 USP36Q9P275 1121 aaKnown RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 ZNF225Q9UK10 706 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 GPR52Q9Y2T5 361 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 PCDHGA1Q9Y5H4 931 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 TRGV8A0A0C4DH27 118 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 C12orf71A8MTZ7 269 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 RAB3DO95716 219 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ITGB2P05107 769 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 EDN3P14138 238 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 RAD52P43351 418 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SGSHP51688 502 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 PLA2G7Q13093 441 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SLC10A1Q14973 349 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 MLF2Q15773 248 aaPredicted RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 PPP1R3AQ16821 1122 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 C17orf99Q6UX52 265 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 CREB3L2Q70SY1 520 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 GPRIN1Q7Z2K8 1008 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 PDZD3Q86UT5 571 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 CPOQ8IVL8 374 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 GTPBP8Q8N3Z3 284 aaPredicted RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 OR7G3Q8NG95 312 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 BOD1Q96IK1 185 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZNF597Q96LX8 424 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 OR6C1Q96RD1 312 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 FEVQ99581 238 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 CMSS1Q9BQ75 279 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 BOCQ9BWV1 1114 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SLC12A9Q9BXP2 914 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SPHK1Q9NYA1 384 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TBX10O75333 385 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TGM6O95932 706 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 WNT11O96014 354 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 APOC3P02656 99 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 STSP08842 583 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZNF865P0CJ78 1059 aaPredicted RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 GJA4P35212 333 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ALDH3B2P48448 385 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TECRLQ5HYJ1 363 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 PAPD4Q6PIY7 484 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 TIFABQ6ZNK6 161 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ESX1Q8N693 406 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 OR52R1Q8NGF1 315 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZUFSPQ96AP4 578 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 PEBP4Q96S96 227 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 NUDT22Q9BRQ3 303 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZPBPQ9BS86 351 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SHARPINQ9H0F6 387 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZNF446Q9NWS9 450 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 NFS1Q9Y697 457 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 NUMBLQ9Y6R0 609 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ENPP4Q9Y6X5 453 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 KLF11O14901 512 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 HMGN2P05204 90 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 ANXA7P20073 488 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 RAB13P51153 203 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ERVK-25P63136 954 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 FAM189BP81408 668 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 IL10RAQ13651 578 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SLC36A2Q495M3 483 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 FBXW12Q6X9E4 464 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 PLD6Q8N2A8 252 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 OR6F1Q8NGZ6 308 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 OR2T27Q8NH04 317 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 CHTF18Q8WVB6 975 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TMEM239Q8WW34 195 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SNAPC3Q92966 411 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 MUS81Q96NY9 551 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 SNX18Q96RF0 628 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TESQ9UGI8 421 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 PTBP2Q9UKA9 531 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 CNOT11Q9UKZ1 510 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 TMEM269A0A1B0GVZ9 245 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 KDM4EB2RXH2 506 aaPredicted RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 MCRIP1C9JLW8 97 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 M0QZ24 198 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 IL2RAP01589 272 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 EN2P19622 333 aaPredicted RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 DPP4P27487 766 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TAS2R31P59538 309 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 YPEL5P62699 121 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 FAPQ12884 760 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 PCLAFQ15004 111 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 IRF4Q15306 451 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 NADK2Q4G0N4 442 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 KRBOX4Q5JUW0 171 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TECPR1Q7Z6L1 1165 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 GLIS1Q8NBF1 620 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 CPEB3Q8NE35 698 aaKnown RBP6.76□□□□□ -1.33
UPF2-203ENST00000397053 OR2A12Q8NGT7 310 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 CNIH3Q8TBE1 160 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 TMEM43Q9BTV4 400 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 AIG1Q9NVV5 245 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZDBF2Q9HCK1 2354 aa6.76□□□□□ -1.33
UPF2-203ENST00000397053 ZNF487B1APH4 448 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CASC3O15234 703 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 DNAJB6O75190 326 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CRYBA1P05813 215 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms