RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 UFD1Q92890 307 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 ELF4Q99607 663 aaPredicted RBP14.91□□□□□ -0.02
SNX6-202ENST00000396526 DUSP23Q9BVJ7 150 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 ZNF304Q9HCX3 659 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 TNFRSF10DQ9UBN6 386 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 SUSD2Q9UGT4 822 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 LSM2Q9Y333 95 aaKnown RBP14.91□□□□□ -0.02
SNX6-202ENST00000396526 SERINC4A6NH21 518 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 METTL15A6NJ78 407 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 OR1D4P47884 311 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 DHPSP49366 369 aaPredicted RBP14.91□□□□□ -0.02
SNX6-202ENST00000396526 CTBP2P56545 445 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 NNATQ16517 81 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 ARMC4Q5T2S8 1044 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 C19orf48Q6RUI8 117 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 SLC35F3Q8IY50 421 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 DAZLQ92904 295 aaKnown RBP14.91□□□□□ -0.02
SNX6-202ENST00000396526 COX4I2Q96KJ9 171 aa14.91□□□□□ -0.02
SNX6-202ENST00000396526 ZNF223Q9UK11 482 aaPredicted RBP14.91□□□□□ -0.02
SNX6-202ENST00000396526 SAGE2PA6NJ88 616 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 TGFBR3LH3BV60 316 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CDC42EP2O14613 210 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 SLC30A4O14863 429 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 PPM1BO75688 479 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 SLC6A6P31641 620 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.9□□□□□ -0.02
SNX6-202ENST00000396526 TRIM16LQ309B1 348 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 ANKDD1AQ495B1 522 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 AADACL4Q5VUY2 407 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 LYSMD4Q5XG99 296 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CPOQ8IVL8 374 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 D2HGDHQ8N465 521 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 KLHL36Q8N4N3 616 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 BCORP1Q8N888 145 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 TAPBPLQ9BX59 468 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 OR8D2Q9GZM6 311 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 UBQLN4Q9NRR5 601 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 DNAJB12Q9NXW2 375 aaKnown RBP14.9□□□□□ -0.02
SNX6-202ENST00000396526 IL20RAQ9UHF4 553 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
SNX6-202ENST00000396526 OCM2P0CE71 109 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 OCMP0CE72 109 aaPredicted RBP14.9□□□□□ -0.02
SNX6-202ENST00000396526 CT45A8P0DMV1 189 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CT45A9P0DMV2 189 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 SOX3P41225 446 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CT45A2Q5DJT8 189 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 ARHGAP40Q5TG30 622 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 TMPRSS11AQ6ZMR5 421 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 PFN4Q8NHR9 129 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 ASPNQ9BXN1 380 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CABIN1Q9Y6J0 2220 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 SEC16AO15027 2179 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 HTR3EA5X5Y0 456 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 A8MU76 341 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 PRR23D1E9PI22 279 aaPredicted RBP14.9□□□□□ -0.02
SNX6-202ENST00000396526 GTPBP1O00178 669 aaKnown RBP14.9□□□□□ -0.02
SNX6-202ENST00000396526 HRKO00198 91 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 TAF4O00268 1085 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 SCDO00767 359 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 PRR23D2P0DMB1 279 aaPredicted RBP14.9□□□□□ -0.02
SNX6-202ENST00000396526 PTNP21246 168 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CD40LGP29965 261 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 PPICP45877 212 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 DCAF7P61962 342 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 LIPKQ5VXJ0 399 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 QSOX2Q6ZRP7 698 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 ATCAYQ86WG3 371 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 LNX2Q8N448 690 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 ATP13A2Q9NQ11 1180 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 NDUFB11Q9NX14 153 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 CORINQ9Y5Q5 1042 aa14.9□□□□□ -0.02
SNX6-202ENST00000396526 AKAP8O43823 692 aaKnown RBP14.89□□□□□ -0.03
SNX6-202ENST00000396526 NTN1O95631 604 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ENDOUP21128 410 aaKnown RBP14.89□□□□□ -0.03
SNX6-202ENST00000396526 ETV5P41161 510 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ETV1P50549 477 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 PPP5CP53041 499 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 RPS7P62081 194 aaKnown RBP14.89□□□□□ -0.03
SNX6-202ENST00000396526 SSX1Q16384 188 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 SPANXN2Q5MJ10 180 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 NPSR1Q6W5P4 371 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ZNF615Q8N8J6 731 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 B4GALNT2Q8NHY0 566 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 CCNL2Q96S94 520 aaPredicted RBP14.89□□□□□ -0.03
SNX6-202ENST00000396526 COPS7AQ9UBW8 275 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 OR2W5A6NFC9 320 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 SLC22A31A6NKX4 558 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 K7ESF4 209 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ZNF3P17036 446 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 HK1P19367 917 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 MAKP20794 623 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 IDUAP35475 653 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 TGFBR1P36897 503 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ZNF45Q02386 682 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ZP2Q05996 745 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 ELAVL1Q15717 326 aaKnown RBP14.89□□□□□ -0.03
SNX6-202ENST00000396526 WDR74Q6RFH5 385 aaPredicted RBP14.89□□□□□ -0.03
SNX6-202ENST00000396526 Q6ZNX1 250 aa14.89□□□□□ -0.03
SNX6-202ENST00000396526 PHC2Q8IXK0 858 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms