RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 DTNAQ9Y4J8 743 aa16.38■□□□□ 0.21
FXN-203ENST00000396366 HEATR5AQ86XA9 2040 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 RNF103-CHMP3A0A140T963 221 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 C16orf97H3BN30 126 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 GTPBP1O00178 669 aaKnown RBP16.37■□□□□ 0.21
FXN-203ENST00000396366 ZNF195O14628 629 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 ANKRD28O15084 1053 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 DIAPH2O60879 1101 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 SYNGR4O95473 234 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 CPSF4O95639 269 aaKnown RBP16.37■□□□□ 0.21
FXN-203ENST00000396366 PLGP00747 810 aaPredicted RBP16.37■□□□□ 0.21
FXN-203ENST00000396366 KRT16P08779 473 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 KLK2P20151 261 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 PCYT1AP49585 367 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 P2RX1P51575 399 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 NME5P56597 212 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 CARD18P57730 90 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 BST1Q10588 318 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 GPR68Q15743 365 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 DEFB113Q30KQ7 82 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 PDZK1Q5T2W1 519 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 ANKRD42Q8N9B4 389 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 OR8J2Q8NGG1 315 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 MBD6Q96DN6 1003 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 GMPPAQ96IJ6 420 aaPredicted RBP16.37■□□□□ 0.21
FXN-203ENST00000396366 KLHL15Q96M94 604 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 ALPK1Q96QP1 1244 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 MED18Q9BUE0 208 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 SRXN1Q9BYN0 137 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 HAO1Q9UJM8 370 aa16.37■□□□□ 0.21
FXN-203ENST00000396366 MCTS1Q9ULC4 181 aaKnown RBP16.37■□□□□ 0.21
FXN-203ENST00000396366 RNASET2O00584 256 aaKnown RBP16.36■□□□□ 0.21
FXN-203ENST00000396366 SS18L1O75177 396 aaPredicted RBP16.36■□□□□ 0.21
FXN-203ENST00000396366 GOSR1O95249 250 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 NTN1O95631 604 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 CD53P19397 219 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 ME2P23368 584 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 EIF1P41567 113 aaKnown RBP16.36■□□□□ 0.21
FXN-203ENST00000396366 CTBP2P56545 445 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 WDR4P57081 412 aaKnown RBP16.36■□□□□ 0.21
FXN-203ENST00000396366 ADAM8P78325 824 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 FGFBP1Q14512 234 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 CHDHQ8NE62 594 aaPredicted RBP16.36■□□□□ 0.21
FXN-203ENST00000396366 PIK3IP1Q96FE7 263 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 SLC35G5Q96KT7 338 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 TEX37Q96LM6 180 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 OR51I1Q9H343 314 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 MKLN1Q9UL63 735 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 EMC9Q9Y3B6 208 aa16.36■□□□□ 0.21
FXN-203ENST00000396366 FLNAP21333 2647 aaKnown RBP16.36■□□□□ 0.21
FXN-203ENST00000396366 ESPNB1AK53 854 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 H3BNH8 94 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 SOX30O94993 753 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 THBDP07204 575 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 NID1P14543 1247 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 PRKCAP17252 672 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 LBPP18428 481 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 CRYGSP22914 178 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 RIPPLY3P57055 190 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 FOXD4Q12950 439 aaPredicted RBP16.35■□□□□ 0.21
FXN-203ENST00000396366 TMEM176BQ3YBM2 270 aaPredicted RBP16.35■□□□□ 0.21
FXN-203ENST00000396366 SPANXN4Q5MJ08 99 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 HMGN2P46Q86SG4 172 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 LSRQ86X29 649 aaPredicted RBP16.35■□□□□ 0.21
FXN-203ENST00000396366 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 OR6K3Q8NGY3 331 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 RAB8BQ92930 207 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 MARK4Q96L34 752 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 HS3ST6Q96QI5 342 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 C12orf49Q9H741 205 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 PAQR5Q9NXK6 330 aaPredicted RBP16.35■□□□□ 0.21
FXN-203ENST00000396366 ZNF226Q9NYT6 803 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 ACTL7BQ9Y614 415 aa16.35■□□□□ 0.21
FXN-203ENST00000396366 PRSS51A0A1B0GVH4 220 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 SERINC4A6NH21 518 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 C9JVG2 144 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 ZNF264O43296 627 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 UGT2B17O75795 530 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 CYP7B1O75881 506 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 TUBBP07437 444 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 ALDOCP09972 364 aaKnown RBP16.34■□□□□ 0.21
FXN-203ENST00000396366 OR12D1P0DN82 309 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 UFM1P61960 85 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 QPRTQ15274 297 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 ZNF141Q15928 474 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 MAPK14Q16539 360 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 ARHGAP11BQ3KRB8 267 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 PDSS1Q5T2R2 415 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 HHATQ5VTY9 493 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 TNFAIP8L2Q6P589 184 aaPredicted RBP16.34■□□□□ 0.21
FXN-203ENST00000396366 STAC2Q6ZMT1 411 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 WFDC11Q8NEX6 87 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 OR5W2Q8NH69 310 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 MGARPQ8TDB4 240 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 ABHD3Q8WU67 409 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 XAGE5Q8WWM1 108 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 THUMPD3Q9BV44 507 aaKnown RBP16.34■□□□□ 0.21
FXN-203ENST00000396366 NMUR2Q9GZQ4 415 aa16.34■□□□□ 0.21
FXN-203ENST00000396366 MEAF6Q9HAF1 191 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms