RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 GPR83Q9NYM4 423 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 CNOT2Q9NZN8 540 aaKnown RBP13.76□□□□□ -0.21
CCT4-201ENST00000394440 SLC35A3Q9Y2D2 325 aa13.76□□□□□ -0.21
CCT4-201ENST00000394440 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 CSTAP01040 98 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 C21orf33P30042 268 aaPredicted RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 PCYT1AP49585 367 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 NUBP1P53384 320 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 PRKCDQ05655 676 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 TBCEQ15813 527 aaPredicted RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 OCLNQ16625 522 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 LINC00114Q6XXX2 140 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 FAM26EQ8N5C1 309 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 TCEANCQ8N8B7 351 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 C17orf47Q8NEP4 570 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 B3GNT7Q8NFL0 401 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 MYDGFQ969H8 173 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 GAL3ST4Q96RP7 486 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 SPSB2Q99619 263 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 KRCC1Q9NPI7 259 aaPredicted RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 C20orf141Q9NUB4 165 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 COPS7AQ9UBW8 275 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 LNP1A1A4G5 178 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 PRKYO43930 277 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 GDF9O60383 454 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 ENTPD6O75354 484 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 FADS2O95864 444 aaKnown RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 LCN1P31025 176 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 CSTF2P33240 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCT4-201ENST00000394440 NDUFAF6Q330K2 333 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 SLC27A4Q6P1M0 643 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 ANKRD37Q7Z713 158 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 PFN4Q8NHR9 129 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 SEMA4CQ9C0C4 833 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 TVP23BQ9NYZ1 205 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 PPIEQ9UNP9 301 aaKnown RBP13.75□□□□□ -0.21
CCT4-201ENST00000394440 CDH10Q9Y6N8 788 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 GPR179Q6PRD1 2367 aa13.75□□□□□ -0.21
CCT4-201ENST00000394440 H3BMQ9 156 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 LDOC1O95751 146 aaPredicted RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 PTNP21246 168 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 TMBIM6P55061 237 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 CTBP2P56545 445 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 IRF3Q14653 427 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 CD226Q15762 336 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 UBE2UQ5VVX9 321 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 LCN10Q6JVE6 187 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 APOOLQ6UXV4 268 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 TMPRSS11FQ6ZWK6 438 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 AGBL5Q8NDL9 886 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 NFAM1Q8NET5 270 aaPredicted RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 GRHL3Q8TE85 626 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 RORBQ92753 470 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MPP4Q96JB8 637 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 HS6ST2Q96MM7 605 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 COG8Q96MW5 612 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MESP1Q9BRJ9 268 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 NRSN2Q9GZP1 204 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 IRF2BPLQ9H1B7 796 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MEPEQ9NQ76 525 aaPredicted RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 SELENONQ9NZV5 590 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MRTO4Q9UKD2 239 aaKnown RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 FLRT2O43155 660 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 TSPAN2O60636 221 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 ALOX12BO75342 701 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 UTS2O95399 124 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MAKP20794 623 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 TBXA2RP21731 343 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 RBM34P42696 430 aaKnown RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 FXYD6P3P58550 94 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 LSAMPQ13449 338 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 FAAH2Q6GMR7 532 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MRPL14Q6P1L8 145 aaKnown RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 KIRREL2Q6UWL6 708 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 ZNF527Q8NB42 609 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 APCDD1LQ8NCL9 501 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
CCT4-201ENST00000394440 Q96MT0 163 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 PHOX2BQ99453 314 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 CTRCQ99895 268 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 ATP13A2Q9NQ11 1180 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 DNAJC27Q9NZQ0 273 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 MPDZO75970 2070 aa13.74□□□□□ -0.21
CCT4-201ENST00000394440 IGHV3-20A0A0C4DH32 117 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 EFCAB10A6NFE3 127 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 SAGE2PA6NJ88 616 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 MEN1O00255 615 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 CPNE3O75131 537 aaKnown RBP13.73□□□□□ -0.21
CCT4-201ENST00000394440 RFPL3O75679 317 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 HEXBP07686 556 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 STSP08842 583 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 ADRA2AP08913 450 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 ST3GAL4Q11206 333 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 SKP2Q13309 424 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 SLC29A4Q7RTT9 530 aa13.73□□□□□ -0.21
CCT4-201ENST00000394440 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms