RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TFAP2AP05549 437 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 UMODP07911 640 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 IFI30P13284 250 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TCN2P20062 427 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 LCN1P31025 176 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 OMPP47874 163 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PNLIPRP2P54317 469 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TSPAN31Q12999 210 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 SMN1Q16637 294 aaKnown RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 BTBD16Q32M84 506 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ALG10BQ5I7T1 473 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 C3orf38Q5JPI3 329 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 STPG1Q5TH74 334 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TMEM164Q5U3C3 297 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 BROXQ5VW32 411 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 LAIR2Q6ISS4 152 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 CASP12Q6UXS9 341 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 APOOLQ6UXV4 268 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 CD300LDQ6UXZ3 194 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 WDR88Q6ZMY6 472 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PTCHD4Q6ZW05 846 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 MARCH3Q86UD3 253 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 SLCO6A1Q86UG4 719 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 CDK20Q8IZL9 346 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 IQCF1Q8N6M8 205 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 C17orf47Q8NEP4 570 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 DEFB124Q8NES8 71 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PFN4Q8NHR9 129 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 FBLIM1Q8WUP2 373 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 SLC35B4Q969S0 331 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TP53INP1Q96A56 240 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 SH3YL1Q96HL8 342 aaPredicted RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 DEFB126Q9BYW3 111 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 CCDC90BQ9GZT6 254 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 DSN1Q9H410 356 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TOR4AQ9NXH8 423 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TPRKBQ9Y3C4 175 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 MED31Q9Y3C7 131 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PCDHGA1Q9Y5H4 931 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 NPFFR2Q9Y5X5 522 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 OTOGLQ3ZCN5 2332 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 EP300Q09472 2414 aaPredicted RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 HEATR5AQ86XA9 2040 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 OIP5O43482 229 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 NDUFB5O43674 189 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 CHP2O43745 196 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 SCO2O43819 266 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 KLF7O75840 302 aaPredicted RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 LYPD3O95274 346 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TP53P04637 393 aaPredicted RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 CCDC159P0C7I6 412 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ADH7P40394 386 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 STAT5AP42229 794 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PSPHP78330 225 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PIGFQ07326 219 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 GINS1Q14691 196 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 NADK2Q4G0N4 442 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ULK3Q6PHR2 472 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 KIRREL2Q6UWL6 708 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 KIF18BQ86Y91 864 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 RNF113BQ8IZP6 322 aaKnown RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 LSMEM1Q8N8F7 131 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZNF540Q8NDQ6 660 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 OR2Y1Q8NGV0 311 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 RHOXF1Q8NHV9 184 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZNF563Q8TA94 476 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 NUBPLQ8TB37 319 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TEX47Q8TBZ9 253 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 APH1BQ8WW43 257 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 OIT3Q8WWZ8 545 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 SGCDQ92629 289 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 HS6ST2Q96MM7 605 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 IL4I1Q96RQ9 567 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PRRX2Q99811 253 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 LRFN3Q9BTN0 628 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 DDA1Q9BW61 102 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 EGLN3Q9H6Z9 239 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZNF226Q9NYT6 803 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 TVP23BQ9NYZ1 205 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PPIEQ9UNP9 301 aaKnown RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 SNX5Q9Y5X3 404 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PCNX2A6NKB5 2137 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 CCDC160A6NGH7 325 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 TRIM64A6NGJ6 449 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 OR6C70A6NIJ9 312 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 HCRTR2O43614 444 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 WBP4O75554 376 aaKnown RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 PPM1BO75688 479 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 NUDT14O95848 222 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 CD63P08962 238 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 FPR3P25089 353 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 ITPKBP27987 946 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 FBXW4P57775 412 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 GABARAPL2P60520 117 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 CXCR4P61073 352 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 SKP2Q13309 424 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 EIF3IQ13347 325 aaKnown RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 EFR3AQ14156 821 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 PCOLCEQ15113 449 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms