RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PACSIN3Q9UKS6 424 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 MAB21L2Q9Y586 359 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 TIMM10BQ9Y5J6 103 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KLF2Q9Y5W3 355 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 COL6A3P12111 3177 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ANKRD36BQ8N2N9 1353 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 MBD5Q9P267 1494 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KIF15Q9NS87 1388 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 LOC105371267A0A1B0GV96 52 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 A0A1W2PPQ1 181 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 NPIPB6E9PJ23 425 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 H0YJX3 145 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 RFXAPO00287 272 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 MSTNO14793 375 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 AHSA1O95433 338 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KRT6AP02538 564 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 MBPP02686 304 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 TCP1P17987 556 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 ZXDBP98169 803 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CDKL1Q00532 357 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PAX5Q02548 391 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 RBBP4Q09028 425 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 BCL2A1Q16548 175 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CELF3Q5SZQ8 465 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 TTC33Q6PID6 262 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 ZNF474Q6S9Z5 364 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 H2BFWTQ7Z2G1 175 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PID1Q7Z2X4 250 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PRUNE1Q86TP1 453 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 IL22RA2Q969J5 263 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 MRPL13Q9BYD1 178 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 DCAF13Q9NV06 445 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 MAGI1Q96QZ7 1491 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 A0A0J9YYE9 177 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 GABRR3A8MPY1 467 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 HAT1O14929 419 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RS1O15537 224 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SRP72O76094 671 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 EML2O95834 649 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 TRBC1P01850 177 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CRYGCP07315 174 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 HTR2CP28335 458 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RORAP35398 523 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RAB9AP51151 201 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 VAMP7P51809 220 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 OC90Q02509 493 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 PLOD1Q02809 727 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 ZNF691Q5VV52 312 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SLC16A12Q6ZSM3 486 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ZNF367Q7RTV3 350 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 LIX1Q8N485 282 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 TTLQ8NG68 377 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 FBXO25Q8TCJ0 367 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CXorf40AQ8TE69 158 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SLC35C1Q96A29 364 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 FAM89AQ96GI7 184 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 QKIQ96PU8 341 aaKnown RBP eCLIP3.23□□□□□ -1.891e-6■■■■■ 37.6
XRN1-202ENST00000392981 CIB1Q99828 191 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 DGCR6LQ9BY27 220 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ANKRD60Q9BZ19 345 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ATP13A3Q9H7F0 1226 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 TRIM45Q9H8W5 580 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 NHEJ1Q9H9Q4 299 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 SLC39A1Q9NY26 324 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SEMA5BQ9P283 1151 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MAN1B1Q9UKM7 699 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CTNND2Q9UQB3 1225 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 YEATS2Q9ULM3 1422 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 GRIN2DO15399 1336 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 PCDH11YQ9BZA8 1340 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 ANTXRLA6NF34 631 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RNASE1P07998 156 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 ACSM4P0C7M7 580 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ELAVL4P26378 380 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 SERPINB8P50452 374 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RHOAP61586 193 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 KLF5Q13887 457 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 CSRP2Q16527 193 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 NDUFA5Q16718 116 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SLC22A6Q4U2R8 563 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 OR7G1Q8NGA0 311 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 FUBP1Q96AE4 644 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 EEF1AKMT3Q96AZ1 226 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 PELI1Q96FA3 418 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CASD1Q96PB1 797 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RTP3Q9BQQ7 232 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 TXNRD2Q9NNW7 524 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 PIPOXQ9P0Z9 390 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 WDFY4Q6ZS81 3184 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MAST1Q9Y2H9 1570 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ADAMTSL3P82987 1691 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 KPNA3O00505 521 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 UPK3AO75631 287 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ESRRBO95718 433 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CST1P01037 141 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RPLP0P05388 317 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms