RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 VIPR2P41587 438 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 BAK1Q16611 211 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 SSX3Q99909 188 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 DPH1Q9BZG8 443 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 PELI2Q9HAT8 420 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 ASB6Q9NWX5 421 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 MROH6A6NGR9 719 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 C9J4A7 227 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF780AO75290 641 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 BDKRB2P30411 391 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TRIM23P36406 574 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 IDH3GP51553 393 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 RPS25P62851 125 aaKnown RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 IL13RA1P78552 427 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TSPAN31Q12999 210 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 DNTTIP1Q9H147 329 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TMPRSS11EQ9UL52 423 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 NDRG4Q9ULP0 352 aaKnown RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 KCNK6Q9Y257 313 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 MYO10Q9HD67 2058 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TCRBV21S2A2A0A5A6 115 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 B4DGG1 531 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 SLC34A2O95436 690 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 CAV3P56539 151 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TRIM46Q7Z4K8 759 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TMEM234Q8WY98 164 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 TRMT2BQ96GJ1 504 aaKnown RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 DMRT3Q9NQL9 472 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 OR5K4A6NMS3 321 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 TOR1AO14656 332 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 IFNA10P01566 189 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 TP53P04637 393 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 IFNA4P05014 189 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 RPS19P39019 145 aaKnown RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PRPS1P60891 318 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ELOCQ15369 112 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 UBE2NLQ5JXB2 153 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 GPAT4Q86UL3 456 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PLA2G15Q8NCC3 412 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PXT1Q8NFP0 134 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 OR13C3Q8NGS6 347 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ARRDC2Q8TBH0 407 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 STK35Q8TDR2 534 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ALOXE3Q9BYJ1 711 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 LEFTY1O75610 366 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 KCNK5O95279 499 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 CCINQ13939 588 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 TMEM239Q8WW34 195 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 KLHL15Q96M94 604 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ZBTB42B2RXF5 422 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF254O75437 659 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PPP1R3DO95685 299 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 GASTP01350 101 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PIPP12273 146 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 GPX2P18283 190 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF169Q14929 603 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 LRRTM3Q86VH5 581 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 RASGRP3Q8IV61 690 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ADGRF3Q8IZF5 1079 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 CYB561A3Q8NBI2 242 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 FAM3CQ92520 227 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ZMYND19Q96E35 227 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 C4orf36Q96KX1 117 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 RBM38Q9H0Z9 239 aaKnown RBP18.49■□□□□ 0.55
SHANK1-203ENST00000391813 R3HDMLQ9H3Y0 253 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ATG4BQ9Y4P1 393 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 C5AR1P21730 350 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 GRPRP30550 384 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 SORDQ00796 357 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 SSX2Q16385 188 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 SERPINA12Q8IW75 414 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 TERB2Q8NHR7 220 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PNPLA2Q96AD5 504 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 SLC25A46Q96AG3 418 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 LMF1Q96S06 567 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 PKMYT1Q99640 499 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 CAMK2AQ9UQM7 478 aa18.49■□□□□ 0.55
SHANK1-203ENST00000391813 ANTXRLA6NF34 631 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 ID2Q02363 134 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 HTR4Q13639 388 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 NKPD1Q17RQ9 610 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 IER5LQ5T953 404 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 LEG1Q6P5S2 330 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 GLB1L2Q8IW92 636 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 EID2Q8N6I1 236 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF283Q8N7M2 679 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 OR4F15Q8NGB8 312 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 MICU1Q9BPX6 476 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 AGPAT2O15120 278 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 SCAMP1O15126 338 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 CBLP22681 906 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 SLC5A12Q1EHB4 618 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 CTU2Q2VPK5 515 aaKnown RBP18.48■□□□□ 0.55
SHANK1-203ENST00000391813 MDGA1Q8NFP4 955 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 OR6N1Q8NGY5 312 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 DPH7Q9BTV6 452 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 LRP5O75197 1615 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 CROCCQ5TZA2 2017 aa18.48■□□□□ 0.55
SHANK1-203ENST00000391813 PRSS44E7EML9 344 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms