RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 SCN2AQ99250 2005 aa0.41□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RAD54L2Q9Y4B4 1467 aa0.41□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ARID4BQ4LE39 1312 aaPredicted RBP0.4□□□□□ -2.34
RNU6-1228P-201ENST00000391014 C13orf42A0A1B0GVH6 325 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GSAPA4D1B5 854 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 OOEPA6NGQ2 149 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TM9SF1O15321 606 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 SS18L1O75177 396 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GIPP09681 153 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ALPPL2P10696 532 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 LGALS3P17931 250 aaKnown RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CNTN2Q02246 1040 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 SCN1BQ07699 218 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ST3GAL3Q11203 375 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 PPP2R5CQ13362 524 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 SLC39A6Q13433 755 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 NRF1Q16656 503 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 SAXO2Q658L1 398 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 KCTD11Q693B1 232 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ZNF621Q6ZSS3 439 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 RALGPS2Q86X27 583 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ZDHHC21Q8IVQ6 265 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TUSC5Q8IXB3 177 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 NRMQ8IXM6 262 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CENPSQ8N2Z9 138 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 LSMEM1Q8N8F7 131 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 NEK11Q8NG66 645 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 OR8H1Q8NGG4 311 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 OR4A16Q8NH70 328 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 SLC5A11Q8WWX8 675 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TMEM37Q8WXS4 190 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TIMD4Q96H15 378 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 MLPHQ9BV36 600 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 OR11A1Q9GZK7 315 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TMEM206Q9H813 350 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 NKIRAS2Q9NYR9 191 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ZNF629Q9UEG4 869 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ZNF391Q9UJN7 358 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 EXOSC1Q9Y3B2 195 aaKnown RBP0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 POMT1Q9Y6A1 747 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 NPC1L1Q9UHC9 1359 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 PCM1Q15154 2024 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CABIN1Q9Y6J0 2220 aa0.4□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TTC21BQ7Z4L5 1316 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 LOC100131303A0A0U1RQF7 123 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ESYT2A0FGR8 921 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 PPIHO43447 177 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 STK17BO94768 372 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GLULP15104 373 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TCN2P20062 427 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CASTP20810 708 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 TNFSF9P41273 254 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 RPL8P62917 257 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CHRNB3Q05901 458 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GNMTQ14749 295 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 KARSQ15046 597 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CCDC158Q5M9N0 1113 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ATF7IP2Q5U623 682 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 C1orf146Q5VVC0 180 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 SLX4IPQ5VYV7 408 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 BTNL3Q6UXE8 466 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 MFSD6LQ8IWD5 586 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CCDC36Q8IYA8 594 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 OSR2Q8N2R0 312 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 Q8NDZ9 215 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 OR7G3Q8NG95 312 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ART4Q93070 314 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 PDXPQ96GD0 296 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 DNAJC1Q96KC8 554 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GBP5Q96PP8 586 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CDC42EP4Q9H3Q1 356 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 MAGEF1Q9HAY2 307 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 NOX3Q9HBY0 568 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 DUS2Q9NX74 493 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GNPTGQ9UJJ9 305 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 APPL1Q9UKG1 709 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CDH7Q9ULB5 785 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 FOXA2Q9Y261 457 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ZNF407Q9C0G0 2248 aa0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 HELZ2Q9BYK8 2649 aaKnown RBP0.39□□□□□ -2.35
RNU6-1228P-201ENST00000391014 A0A0G2JRQ6 117 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 RBMY1BA6NDE4 496 aaKnown RBP0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 RBMY1EA6NEQ0 496 aaKnown RBP0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ZNF705GA8MUZ8 300 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ENTPD5O75356 428 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ECI2O75521 394 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 AKAP3O75969 853 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 MPZL1O95297 269 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 LALBAP00709 142 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 RBMY1DP0C7P1 496 aaKnown RBP0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 BCKDHAP12694 445 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 ICAM2P13598 275 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 H2AFXP16104 143 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 FERP16591 822 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 IFNAR1P17181 557 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 EPHX2P34913 555 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CTNNA1P35221 906 aaKnown RBP0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 KRT20P35900 424 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 CASP2P42575 452 aa0.38□□□□□ -2.35
RNU6-1228P-201ENST00000391014 GNPDA1P46926 289 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms