RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SKA1Q96BD8 255 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 ASB9Q96DX5 294 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 BMFQ96LC9 184 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 DDX50Q9BQ39 737 aaKnown RBP-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 NLNQ9BYT8 704 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 PAK1IP1Q9NWT1 392 aaPredicted RBP-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 OR12D3Q9UGF7 316 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 ASF1AQ9Y294 204 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 CACNA1GO43497 2377 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 PLEKHH1Q9ULM0 1364 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 TET2Q6N021 2002 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 A0A0G2JN53 185 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ESYT2A0FGR8 921 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 IDSB3KWA1 339 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 TM9SF1O15321 606 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 SUPT3HO75486 399 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 IGLV2-23P01705 113 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ICAM2P13598 275 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 CPA3P15088 417 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 RFC2P35250 354 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 TGFBR2P37173 567 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 CAPZA1P52907 286 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 RPL8P62917 257 aaKnown RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 FLI1Q01543 452 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF816Q0VGE8 651 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 KARSQ15046 597 aaKnown RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF699Q32M78 642 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 RABL6Q3YEC7 729 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 LRRC38Q5VT99 294 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 C1orf146Q5VVC0 180 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 CD164L2Q6UWJ8 174 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ARCQ7LC44 396 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 SMC5Q8IY18 1101 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 C18orf15Q96N68 181 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 PLGRKTQ9HBL7 147 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 SLC40A1Q9NP59 571 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 WRAP73Q9P2S5 460 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ERVK-18Q9QC07 812 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 VWDEQ8N2E2 1590 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 CARMIL3Q8ND23 1372 aa-0.06□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF850A8MQ14 1090 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 RBFOX2O43251 390 aaKnown RBP eCLIP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 PPIHO43447 177 aaKnown RBP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 GAS8O95995 478 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 IGLV6-57P01721 117 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 IGKV1-16P04430 117 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 ALPPP05187 535 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 FCARP24071 287 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 RDXP35241 583 aaKnown RBP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 SOAT1P35610 550 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 TAS2R19P59542 299 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 KRTAP10-4P60372 401 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 TCP11X2Q5H9J9 407 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 SPATA1Q5VX52 437 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 SLX4IPQ5VYV7 408 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 CTRB2Q6GPI1 263 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 FRMPD2BQ6IN97 320 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 NUP93Q8N1F7 819 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 TRUB1Q8WWH5 349 aaKnown RBP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 TSG101Q99816 390 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF649Q9BS31 505 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 ANGPTL4Q9BY76 406 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 RBM28Q9NW13 759 aaKnown RBP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 EXOSC1Q9Y3B2 195 aaKnown RBP-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 MAD1L1Q9Y6D9 718 aa-0.07□□□□□ -2.42
RNU6-239P-201ENST00000390990 A0A1W2PP18 115 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 H3BMH7 237 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 LGALS9O00182 355 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 CCNKO75909 580 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 GLCEO94923 617 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TDGF1P13385 188 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TSPAN8P19075 237 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 CTNNA1P35221 906 aaKnown RBP-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 NPY2RP49146 381 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 UBE2AP49459 152 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TDGF1P3P51864 188 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TGFBR3Q03167 851 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 CDC20Q12834 499 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 KRTAP21-1Q3LI58 79 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 AGKQ53H12 422 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TMEM225Q6GV28 225 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 DPY19L2P2Q6ZN68 376 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 Q6ZSA8 131 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TOM1L2Q6ZVM7 507 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 ENOSF1Q7L5Y1 443 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 IFNEQ86WN2 208 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TMEM126BQ8IUX1 230 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZDHHC21Q8IVQ6 265 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 NECAP1Q8NC96 275 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 DTX3LQ8TDB6 740 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 RAB39BQ96DA2 213 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 DNAJC1Q96KC8 554 aaKnown RBP-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 TSPAN18Q96SJ8 248 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 MCHR1Q99705 422 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 DUS2Q9NX74 493 aaKnown RBP-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF226Q9NYT6 803 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 KIF25Q9UIL4 384 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 PLA2G4CQ9UP65 541 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 PLLPQ9Y342 182 aa-0.08□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF337Q9Y3M9 751 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms