RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PSKH1P11801 424 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TDGF1P13385 188 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LAMP2P13473 410 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CD59P13987 128 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 EPORP19235 508 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 BDNFP23560 247 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 EEF1GP26641 437 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PSMB5P28074 263 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CTNNB1P35222 781 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 GCKP35557 465 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CEACAM6P40199 344 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RPL13AP40429 203 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC1A3P43003 542 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 NAMPTP43490 491 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR4P46093 362 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 GYG1P46976 350 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 STT3AP46977 705 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PIP4K2AP48426 406 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TDGF1P3P51864 188 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 METAP1P53582 386 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RARSP54136 660 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PNLIPRP1P54315 467 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ATP1B3P54709 279 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LIM2P55344 173 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CLDN6P56747 220 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 STARD6P59095 220 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PPP1CBP62140 327 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 AP2B1P63010 937 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 UBXN2AP68543 259 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PPP2R2BQ00005 443 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM115Q12893 351 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ALCAMQ13740 583 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 GK3PQ14409 553 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 KCTD2Q14681 263 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC17A1Q14916 467 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PDK1Q15118 436 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SURF2Q15527 256 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MAPK11Q15759 364 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MEA1Q16626 185 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA0753Q2KHM9 967 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 KLK9Q2XQG4 91 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ARL13BQ3SXY8 428 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 FUT11Q495W5 492 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CRY2Q49AN0 593 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC37A5PQ49AS3 106 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CTXN3Q4LDR2 81 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 AGKQ53H12 422 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SMUG1Q53HV7 270 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC10Q5BKY1 277 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RARS2Q5T160 578 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LRIF1Q5T3J3 769 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC9C2Q5TAH2 1124 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LGSNQ5TDP6 509 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM222AQ5U5X8 452 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TAF3Q5VWG9 929 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LGALS9CQ6DKI2 356 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 KLHL10Q6JEL2 608 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MED27Q6P2C8 311 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 KRTAP26-1Q6PEX3 210 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 KLHL35Q6PF15 583 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TSSK4Q6SA08 328 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 DHRS11Q6UWP2 260 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF730Q6ZMV8 503 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ZCCHC23Q6ZST2 131 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RFLNAQ6ZTI6 216 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RFPL4BQ6ZWI9 263 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MOB2Q70IA6 237 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 FP248Q71RG6 208 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ASRGL1Q7L266 308 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RRAGAQ7L523 313 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ARCQ7LC44 396 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PAGE2Q7Z2X7 111 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RALGPS2Q86X27 583 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 C17orf82Q86X59 251 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CALHM1Q8IU99 346 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CBWD2Q8IUF1 395 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ARID3BQ8IVW6 561 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MFSD6LQ8IWD5 586 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 UNC45BQ8IWX7 931 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SMAP1Q8IYB5 467 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SYTL1Q8IYJ3 562 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TAGAPQ8N103 731 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC43Q8N309 656 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC43A2Q8N370 569 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TCAIMQ8N3R3 496 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RYBPQ8N488 228 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 EIF4E3Q8N5X7 224 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CSNK1A1LQ8N752 337 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PLD5Q8N7P1 536 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC35G3Q8N808 338 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SYT2Q8N9I0 419 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 NKAPP1Q8N9T2 125 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CAMKVQ8NCB2 501 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4D9Q8NGE8 314 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 OR8K1Q8NGG5 319 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2A12Q8NGT7 310 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC35G2Q8TBE7 412 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CIRBP-AS1Q8TBR5 109 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 BRSK1Q8TDC3 778 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MCOLN3Q8TDD5 553 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms