RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 FAM69AQ5T7M9 428 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 TIGD3Q6B0B8 471 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 TCTE3Q8IZS6 198 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 OR13C2Q8NGS9 318 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 TBC1D20Q96BZ9 403 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 TM4SF18Q96CE8 201 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 HAVCR1Q96D42 359 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 CPNE2Q96FN4 548 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 CST11Q9H112 138 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 RXFP3Q9NSD7 469 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 SNAPC5O75971 98 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 AMY2AP04746 511 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 SYPP08247 313 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 CD6P30203 668 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 RAB28P51157 221 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 CLDN2P57739 230 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 BTG1P62324 171 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 EIF2B5Q13144 721 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 BCL2A1Q16548 175 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 LAIR1Q6GTX8 287 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 LAIR2Q6ISS4 152 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZCCHC12Q6PEW1 402 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF322Q6U7Q0 402 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 LYPD8Q6UX82 237 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 OR2A12Q8NGT7 310 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 LRIG1Q96JA1 1093 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 SFXN2Q96NB2 322 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 SLC6A7Q99884 636 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 GLIPR2Q9H4G4 154 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 Q9N2J8 555 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 A4GALTQ9NPC4 353 aa12.3□□□□□ -0.44
TRAPPC9-201ENST00000389328 C11orf98E9PRG8 122 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 EIF1AYO14602 144 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 UBL3O95164 117 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 FARS2O95363 451 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 WISP3O95389 354 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PRKXP51817 358 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ARHGDIBP52566 201 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PARS2Q7L3T8 475 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 TPRA1Q86W33 373 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF683Q8IZ20 524 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 TP53I13Q8NBR0 393 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 TMEM255BQ8WV15 326 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ASF1BQ9NVP2 202 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CIB4A0PJX0 185 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 METTL21EPA6NDL7 271 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PLPP1O14494 284 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 SIX6O95475 246 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CSTAP01040 98 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 HTR2AP28223 471 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 EIF1AXP47813 144 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 HTR4Q13639 388 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 FGL2Q14314 439 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 INSL4Q14641 139 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 NKPD1Q17RQ9 610 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CD276Q5ZPR3 534 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 NKAIN4Q8IVV8 208 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 SLC35F2Q8IXU6 374 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 RDH10Q8IZV5 341 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 RNASE11Q8TAA1 199 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PPP1R14AQ96A00 147 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PELI2Q9HAT8 420 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACSS1Q9NUB1 689 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 MARCH5Q9NX47 278 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ABRACLQ9P1F3 81 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 FBXL2Q9UKC9 423 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CHST2Q9Y4C5 530 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CCL27Q9Y4X3 112 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 APODP05090 189 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CSRP3P50461 194 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 DGCR2P98153 550 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 EXOSC2Q13868 293 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 FAM27D1Q5T7N8 215 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 GPR155Q7Z3F1 870 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ASPGQ86U10 573 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 NRSN1Q8IZ57 195 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ERVK-19Q9WJR5 959 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CDHR4A6H8M9 788 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 NAP1L6A6NFF2 107 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACOT7O00154 380 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 FZD6O60353 706 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 FGF18O76093 207 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CD22P20273 847 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 OR10A3P58181 314 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 RAP2BP61225 183 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 RAB33AQ14088 237 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CDNFQ49AH0 187 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF454Q8N9F8 522 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 OR2L3Q8NG85 312 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 CMKLR1Q99788 373 aa12.29□□□□□ -0.44
TRAPPC9-201ENST00000389328 AIFM2Q9BRQ8 373 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms