RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 HIVEP2P31629 2446 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 ALPK2Q86TB3 2170 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 CENPVL1A0A0U1RR11 272 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 H7C1Q1 480 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 GTPBP1O00178 669 aaKnown RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 SMAD7O15105 426 aaKnown RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 KLF4O43474 513 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 LCN1P31025 176 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 RPL3P39023 403 aaKnown RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 CARD18P57730 90 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 HBA1P69905 142 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 ZNF239Q16600 458 aaKnown RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 TMEM176BQ3YBM2 270 aaPredicted RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 KLHL26Q53HC5 615 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 SHEQ5VZ18 495 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 OR4F3Q6IEY1 312 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 NUFIP2Q7Z417 695 aaKnown RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 RIMKLAQ8IXN7 391 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 PSMA8Q8TAA3 256 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 PPP1R14CQ8TAE6 165 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 SFXN5Q8TD22 340 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 AENQ8WTP8 325 aaKnown RBP12.63□□□□□ -0.39
SHOX-202ENST00000381575 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.63□□□□□ -0.39
SHOX-202ENST00000381575 COQ8BQ96D53 544 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 Q96MF0 132 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 DUSP26Q9BV47 211 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 ACTR6Q9GZN1 396 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 ATAD3AQ9NVI7 634 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
SHOX-202ENST00000381575 A0A1W2PNR3 127 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 TRIM64A6NGJ6 449 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 ZNF195O14628 629 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 TYROBPO43914 113 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 TUBBP07437 444 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 DDX5P17844 614 aaKnown RBP12.62□□□□□ -0.39
SHOX-202ENST00000381575 P2RX1P51575 399 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 KRTAP21-3Q3LHN1 58 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 LSM12Q3MHD2 195 aaKnown RBP12.62□□□□□ -0.39
SHOX-202ENST00000381575 PDSS1Q5T2R2 415 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 PDZK1Q5T2W1 519 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 CLEC9AQ6UXN8 241 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 YTHDF3Q7Z739 585 aaKnown RBP12.62□□□□□ -0.39
SHOX-202ENST00000381575 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 ZNF619Q8N2I2 560 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 ZNF527Q8NB42 609 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 GPR119Q8TDV5 335 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 RNF128Q8TEB7 428 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 PIGTQ969N2 578 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 PLPPR2Q96GM1 343 aa12.62□□□□□ -0.39
SHOX-202ENST00000381575 PAQR5Q9NXK6 330 aaPredicted RBP12.62□□□□□ -0.39
SHOX-202ENST00000381575 NPIPB9F8W1W9 429 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 CYP7B1O75881 506 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 HSPA4LO95757 839 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 NID1P14543 1247 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 PRKCAP17252 672 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 PRPS1L1P21108 318 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 FPR1P21462 350 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 ELK4P28324 431 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 ETV4P43268 484 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 ATP12AP54707 1039 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 GPR68Q15743 365 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 BEX5Q5H9J7 111 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 ZNF704Q6ZNC4 412 aaPredicted RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 MTERF4Q7Z6M4 381 aaKnown RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 HMGN2P46Q86SG4 172 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 ANKRD46Q86W74 232 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 NUDCD3Q8IVD9 361 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 ZNF781Q8N8C0 355 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 CAVIN3Q969G5 261 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 REXO5Q96IC2 774 aaKnown RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 PRPF18Q99633 342 aaKnown RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 ROPN1BQ9BZX4 212 aaPredicted RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 BHLHE41Q9C0J9 482 aaPredicted RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 QRSL1Q9H0R6 528 aaKnown RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 ROPN1Q9HAT0 212 aaPredicted RBP12.61□□□□□ -0.39
SHOX-202ENST00000381575 HHATLQ9HCP6 504 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 KCNE5Q9UJ90 142 aa12.61□□□□□ -0.39
SHOX-202ENST00000381575 RNF103-CHMP3A0A140T963 221 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 C9JVG2 144 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 H3BNH8 94 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 LY6G6DO95868 133 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 KRT16P08779 473 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 UBL4AP11441 157 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 ENPP1P22413 925 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 SERPINB5P36952 375 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 EIF1P41567 113 aaKnown RBP12.6□□□□□ -0.39
SHOX-202ENST00000381575 QPRTQ15274 297 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 CHI3L2Q15782 390 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 TFAP2EQ6VUC0 442 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 C20orf204Q6ZNR8 217 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 BEND4Q6ZU67 534 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 C6orf120Q7Z4R8 191 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms