RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MAOAP21397 527 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 DHPSP49366 369 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 SRP9P49458 86 aaKnown RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 TAF10Q12962 218 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 UBXN2BQ14CS0 331 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 TECRLQ5HYJ1 363 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PPP1R3BQ86XI6 285 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF610Q8N9Z0 462 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 OR4E2Q8NGC2 313 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 GPR78Q96P69 363 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 FCRL4Q96PJ5 515 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 TM6SF2Q9BZW4 377 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 MAGEH1Q9H213 219 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 UBQLN3Q9H347 655 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PTGES2Q9H7Z7 377 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 TMEM184CQ9NVA4 438 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 DHCR7Q9UBM7 475 aaKnown RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 ANKUB1A6NFN9 424 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 K7ERQ8 282 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 HIST1H2ABP04908 130 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 RAB6AP20340 208 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 EDNRBP24530 442 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 GALNSP34059 522 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 GIPRP48546 466 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PGGT1BP53609 377 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 MEF2AQ02078 507 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 C6orf136Q5SQH8 315 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 HIST3H2AQ7L7L0 130 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 P4HA3Q7Z4N8 544 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 HORMAD2Q8N7B1 307 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF433Q8N7K0 673 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 OR8J1Q8NGP2 316 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 HIST1H2ACQ93077 130 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 MS4A4EQ96PG1 132 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 COPS8Q99627 209 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 RAI2Q9Y5P3 530 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PIRO00625 290 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 SMPD2O60906 423 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 LRATO95237 230 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 OR2C1O95371 312 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 ACHEP22303 614 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 ADH6P28332 368 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 S100A7P31151 101 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 CNR2P34972 360 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PTGER3P43115 390 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 CRISP1P54107 249 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 EPHB3P54753 998 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 RAP1AP62834 184 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 PARGQ86W56 976 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 ESAMQ96AP7 390 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 UBXN10Q96LJ8 280 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 SOX7Q9BT81 388 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 DUSP26Q9BV47 211 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 DDA1Q9BW61 102 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 TMEM235A6NFC5 223 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 RPP14O95059 124 aaKnown RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ABOP16442 354 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 KDELR2P33947 212 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 RAG2P55895 527 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 POLR2LP62875 67 aaKnown RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 PITX1P78337 314 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 E2F1Q01094 437 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SLC5A12Q1EHB4 618 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 PLK5Q496M5 336 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 PYCR3Q53H96 274 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 C1orf185Q5T7R7 199 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CLEC14AQ86T13 490 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 LRRTM4Q86VH4 590 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CILP2Q8IUL8 1156 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 MISPQ8IVT2 679 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 MFSD6LQ8IWD5 586 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CFAP52Q8N1V2 620 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 BPIFB2Q8N4F0 458 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OR1S2Q8NGQ3 325 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CDCA4Q9BXL8 241 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 HMX1Q9NP08 348 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 LAMB1P07942 1786 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ARAP2Q8WZ64 1704 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ZCWPW2A0A1B0GU75 182 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SEPT4O43236 478 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SUSD5O60279 629 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 HIST1H1BP16401 226 aaKnown RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 BDKRB2P30411 391 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 AHRP35869 848 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 AQP2P41181 271 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ALDH3B1P43353 468 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF84P51523 738 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 DCST1Q5T197 706 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM151BQ6UXP7 276 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 WDR88Q6ZMY6 472 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM185AQ8N0U4 392 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM24BQ8N5W8 94 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms