RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 DEPDC1Q5TB30 811 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 PLAG1Q6DJT9 500 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 TCTN3Q6NUS6 607 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 KLHL17Q6TDP4 642 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 PRICKLE2Q7Z3G6 844 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 LINC00471Q8N535 108 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 B3GNT7Q8NFL0 401 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 OR9Q2Q8NGE9 314 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 OR52J3Q8NH60 311 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 PIK3R3Q92569 461 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 MS4A6EQ96DS6 147 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 F2RL3Q96RI0 385 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 WDR77Q9BQA1 342 aaPredicted RBP11.44□□□□□ -0.58
VRK3-202ENST00000377011 CDADC1Q9BWV3 514 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 FAM117AQ9C073 453 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 TGIF2Q9GZN2 237 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 MS4A12Q9NXJ0 267 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 SLC22A7Q9Y694 548 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 LRIT2A6NDA9 550 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 H0YIG0 161 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MKRN2OSH3BPM6 223 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 TGFBR3LH3BV60 316 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 CCRL2O00421 344 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 SAP18O00422 153 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 RTCAO00442 366 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 PCDH17O14917 1159 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 PDPK1O15530 556 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 ZIC2O95409 532 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 PTHP01270 115 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 TNFRSF1BP20333 461 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 AVPR1BP47901 424 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 DEFA1P59665 94 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 DEFA3P59666 94 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 TRA2BP62995 288 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 ALDH6A1Q02252 535 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 PCOLCEQ15113 449 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 NDUFA9Q16795 377 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 PRR30Q53SZ7 412 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 KHDRBS2Q5VWX1 349 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 SLX4IPQ5VYV7 408 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 PTCHD4Q6ZW05 846 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MED25Q71SY5 747 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 KRT73Q86Y46 540 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 RBMXL3Q8N7X1 1067 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 CCDC32Q9BV29 185 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 TAPBPLQ9BX59 468 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MS4A8Q9BY19 250 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 UCK2Q9BZX2 261 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 CXorf36Q9H7Y0 433 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 NMNAT1Q9HAN9 279 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 SLC25A19Q9HC21 320 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MKKSQ9NPJ1 570 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 SEMA3GQ9NS98 782 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 ACSS1Q9NUB1 689 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 NPAP1Q9NZP6 1156 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 CRNNQ9UBG3 495 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 ACAD8Q9UKU7 415 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 IGHV1-45A0A0A0MS14 117 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 SLC28A2O43868 658 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MFN2O95140 757 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 HEXBP07686 556 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 DBTP11182 482 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 S100A1P23297 94 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 NUDT6P53370 316 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 BTN3A2P78410 334 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 SELENBP1Q13228 472 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MINDY4Q4G0A6 757 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 C12orf73Q69YU5 71 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 TMEM205Q6UW68 189 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 ZNF793Q6ZN11 406 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 AKAP14Q86UN6 197 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 CA13Q8N1Q1 262 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 Q8NA96 180 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 PSMF1Q92530 271 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 ZNF607Q96SK3 696 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 MGLLQ99685 303 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 C3orf14Q9HBI5 128 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 NXT1Q9UKK6 140 aaKnown RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 CLDN16Q9Y5I7 305 aa11.43□□□□□ -0.58
VRK3-202ENST00000377011 RP1L1Q8IWN7 2480 aaPredicted RBP11.43□□□□□ -0.58
VRK3-202ENST00000377011 SHANK1Q9Y566 2161 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 ANKDD1BA6NHY2 528 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 J3KTA2 159 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 PEX12O00623 359 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 PLPP1O14494 284 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 ASNA1O43681 348 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 B4GALT2O60909 372 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 GASTP01350 101 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 SCG5P05408 212 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 ITGA3P26006 1051 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 CERS1P27544 350 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 GSSP48637 474 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 PCYT1AP49585 367 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 MAPK12P53778 367 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 COPZ1P61923 177 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 KCNJ8Q15842 424 aa11.42□□□□□ -0.58
VRK3-202ENST00000377011 PRSS53Q2L4Q9 553 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms