RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 L3MBTL4Q8NA19 623 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 OLIG1Q8TAK6 271 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 DCLRE1CQ96SD1 692 aaKnown RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 NKX6-2Q9C056 277 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-204ENST00000375290 GHRLQ9UBU3 117 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ALAS2P22557 587 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 SLC30A7Q8NEW0 376 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ZCCHC10Q8TBK6 192 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 MICU1Q9BPX6 476 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 IL17CQ9P0M4 197 aa9.6□□□□□ -0.87
PTCH1-204ENST00000375290 ALPIP09923 528 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 PIGFQ07326 219 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 PPP1R8Q12972 351 aaKnown RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SEMA3BQ13214 749 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SDHAF4Q5VUM1 108 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 RASD1Q9Y272 281 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF780AO75290 641 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 C8AP07357 584 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 AKR1C4P17516 323 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 RAB4AP20338 218 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ZP3P21754 424 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 VITQ6UXI7 678 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SLC7A5P1Q8MH63 180 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 EDAQ92838 391 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SLC25A36Q96CQ1 311 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 C20orf85Q9H1P6 137 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 KCNIP1Q9NZI2 227 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 DOCK2Q92608 1830 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF850A8MQ14 1090 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 NRLP54845 237 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 LRRC37A5PQ49AS3 106 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 MLIPQ5VWP3 458 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 H3F3CQ6NXT2 135 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF765Q7L2R6 523 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ARL14EPQ8N8R7 260 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 FAM46AQ96IP4 442 aaKnown RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CERS4Q9HA82 394 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 OR2S2Q9NQN1 319 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 OSER1Q9NX31 292 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 NRP1O14786 923 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 FABP7O15540 132 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 HBQ1P09105 142 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CHRNEQ04844 493 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 PRKCZQ05513 592 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 LTB4RQ15722 352 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 PLBD1Q6P4A8 553 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CCDC120Q96HB5 630 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 INTS14Q96SY0 518 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CPPED1Q9BRF8 314 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 RAD1O60671 282 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CD68P34810 354 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 RPL35P42766 123 aaKnown RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 H3F3AP84243 136 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 KIR2DS3Q14952 304 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ZBTB37Q5TC79 503 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 LILRB2Q8N423 598 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SOX17Q9H6I2 414 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 J3QR89 54 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 OR56B2PQ8NGI1 322 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 METTL17Q9H7H0 456 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 MSRAQ9UJ68 235 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 STRAPQ9Y3F4 350 aaKnown RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 TRAV18A0A075B6X5 111 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 OR6C6A6NF89 314 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 FKTNO75072 461 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CPEP16870 476 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 C21orf33P30042 268 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SEC61A1P61619 476 aaKnown RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 CLLU1Q5K131 121 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 ACPTQ9BZG2 426 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 SERPINA12Q8IW75 414 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 KREMEN2Q8NCW0 462 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 OR6F1Q8NGZ6 308 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 WDR6Q9NNW5 1121 aaKnown RBP9.59□□□□□ -0.87
PTCH1-204ENST00000375290 AKIP1Q9NQ31 210 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 RLIMQ9NVW2 624 aa9.59□□□□□ -0.87
PTCH1-204ENST00000375290 LDB2O43679 373 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 LGI1O95970 557 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 CHRM2P08172 466 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 ATXN7L3Q14CW9 347 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-204ENST00000375290 FOXRED2Q8IWF2 684 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OR10R2Q8NGX6 335 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 QRSL1Q9H0R6 528 aaKnown RBP9.58□□□□□ -0.88
PTCH1-204ENST00000375290 ALS2Q96Q42 1657 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 MYOCOSA0A1B0GUC4 107 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 A0A1B0GVG6 124 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 CLDN20P56880 219 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SOHLH1Q5JUK2 328 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 KCNG3Q8TAE7 436 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 KLRF1Q9NZS2 232 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 CPNE7Q9UBL6 633 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SLCO3A1Q9UIG8 710 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 POMT1Q9Y6A1 747 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 DFFBO76075 338 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 GBAP04062 536 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 ADRA1AP35348 466 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms