RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TAF8Q7Z7C8 310 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 LHFPL3Q86UP9 236 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 MARCH9Q86YJ5 346 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 GRAMD2AQ8IUY3 354 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 CPOQ8IVL8 374 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 CMIPQ8IY22 773 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 C19orf18Q8NEA5 215 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 OIT3Q8WWZ8 545 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 G6PC3Q9BUM1 346 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 SYNPO2LQ9H987 977 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 CMC2Q9NRP2 79 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 ZNF223Q9UK11 482 aaPredicted RBP11.34□□□□□ -0.59
UBR4-203ENST00000375225 CEP192Q8TEP8 1941 aa11.34□□□□□ -0.59
UBR4-203ENST00000375225 LOC105369274A0A096LPK9 316 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 LOC102723532A0A0G2JNH3 316 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 SPTY2D1-AS1A0A0U1RR47 76 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 DAPL1A0PJW8 107 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 OR5K3A6NET4 321 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 TMEM221A6NGB7 291 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 CLDN4O14493 209 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 PIP5K1CO60331 668 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 SRPX2O60687 465 aaPredicted RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 CCNKO75909 580 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 MT-ND5P03915 603 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 RNH1P13489 461 aaKnown RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 DRD5P21918 477 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 MTNR1BP49286 362 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 VSX2P58304 361 aaPredicted RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 HOXC5Q00444 222 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 CCNJQ5T5M9 372 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 NIPAL3Q6P499 406 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 PAMR1Q6UXH9 720 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 RTL4Q6ZR62 310 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 ZNF440Q8IYI8 595 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 OR4N4Q8N0Y3 316 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 FRMD1Q8N878 549 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 NEIL3Q8TAT5 605 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 DNAJA4Q8WW22 397 aaPredicted RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 SPRYD4Q8WW59 207 aaPredicted RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 TM9SF4Q92544 642 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 KCTD12Q96CX2 325 aaKnown RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 BPIFA2Q96DR5 249 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 TRMT61AQ96FX7 289 aaKnown RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 SDHCQ99643 169 aaPredicted RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 PRSS27Q9BQR3 290 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 NDC1Q9BTX1 674 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 LMF2Q9BU23 707 aaKnown RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 KATNB1Q9BVA0 655 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 IFT27Q9BW83 186 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 DPH1Q9BZG8 443 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 HINT3Q9NQE9 182 aaKnown RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 C14orf119Q9NWQ9 140 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 BABAM2Q9NXR7 383 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 PLEKHB1Q9UF11 243 aaPredicted RBP11.33□□□□□ -0.6
UBR4-203ENST00000375225 KLHL21Q9UJP4 597 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 ZNF221Q9UK13 617 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 CSNK1G3Q9Y6M4 447 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 FANCMQ8IYD8 2048 aa11.33□□□□□ -0.6
UBR4-203ENST00000375225 ZNF860A6NHJ4 632 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 GABRPO00591 440 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 BHLHE40O14503 412 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 POLR1CO15160 346 aaPredicted RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 LDB3O75112 727 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 PPM1BO75688 479 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 MSL3P1P0C860 447 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 PRKAR1AP10644 381 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 CELP19835 753 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 MYL9P24844 172 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 MAP3K8P41279 467 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 GPR143P51810 404 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 RPS7P62081 194 aaKnown RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.63e-9■■□□□ 13
UBR4-203ENST00000375225 FABP5Q01469 135 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 HHEXQ03014 270 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 STX4Q12846 297 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 GALEQ14376 348 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 NDUFA5Q16718 116 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 GLYR1Q49A26 553 aaPredicted RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 RSBN1Q5VWQ0 802 aaPredicted RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 PARGQ86W56 976 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 ZNF595Q8IYB9 648 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 UBQLNLQ8IYU4 475 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 SLC22A18ASQ8N1D0 253 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 C19orf47Q8N9M1 422 aaKnown RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 ZNF485Q8NCK3 441 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 IL17RDQ8NFM7 739 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 OR4F15Q8NGB8 312 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 OR52R1Q8NGF1 315 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 OR51G2Q8NGK0 314 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 CTHRC1Q96CG8 243 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 RBM18Q96H35 190 aaKnown RBP11.32□□□□□ -0.6
UBR4-203ENST00000375225 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms