RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PARP16Q8N5Y8 322 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 GPR148Q8TDV2 347 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 GAB3Q8WWW8 586 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 DTD2Q96FN9 168 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF587Q96SQ5 575 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 DPH1Q9BZG8 443 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 IL21RQ9HBE5 538 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 VAPAQ9P0L0 249 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF225Q9UK10 706 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 ATXN7L1Q9ULK2 861 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 SLC6A5Q9Y345 797 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 KIAA0100Q14667 2235 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF705FA8MVS1 300 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 RNASET2O00584 256 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 SYT7O43581 403 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF705DP0CH99 300 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF705BP0CI00 300 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 CRHBPP24387 322 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 RABIFP47224 123 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 TAS2R20P59543 309 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 TBCEQ15813 527 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 NDUFAF5Q5TEU4 345 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 HSD11B1LQ7Z5J1 315 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 SPRYD4Q8WW59 207 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 OR1A2Q9Y585 309 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 B3GALT1Q9Y5Z6 326 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 DNMT3AQ9Y6K1 912 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 AP1M2Q9Y6Q5 423 aa11.55□□□□□ -0.56
NPLOC4-202ENST00000374747 HMGA1P17096 107 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 HNRNPA2B1P22626 353 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 PER3P56645 1201 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF691Q5VV52 312 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 DNAJC22Q8N4W6 341 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 ADAMTS18Q8TE60 1221 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 LIN37Q96GY3 246 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 DEFB126Q9BYW3 111 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 PCDHA9Q9Y5H5 950 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 FER1L6Q2WGJ9 1857 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 ARNTLO00327 626 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 AGPAT2O15120 278 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 NUPL2O15504 423 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 RAB28P51157 221 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 DLX5P56178 289 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 GBX1Q14549 363 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 RHOXF1Q8NHV9 184 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 SFXN5Q8TD22 340 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 BRIX1Q8TDN6 353 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 CREB3L4Q8TEY5 395 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 SLC22A12Q96S37 553 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 HOXD1Q9GZZ0 328 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 TMEM100Q9NV29 134 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 SLC7A7Q9UM01 511 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 COL11A1P12107 1806 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 LOC102723532A0A0G2JNH3 316 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 JUNDP17535 347 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 FBLP22087 321 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 FOXA1P55317 472 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 SNU13P55769 128 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 TMEM240Q5SV17 173 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF534Q76KX8 674 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 OR4N5Q8IXE1 308 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 OR51L1Q8NGJ5 315 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 LINC01599Q8WXQ3 324 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 TGM7Q96PF1 710 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 PINK1Q9BXM7 581 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 PRDM9Q9NQV7 894 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 APOBEC3BQ9UH17 382 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 TTC3P53804 2025 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 FAM230AA0A1W2PPH8 454 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 H3BQ06 376 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 C1QAP02745 245 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 GAAP10253 952 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 CHATP28329 748 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 FASLGP48023 281 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 SPCS2Q15005 226 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 IER5LQ5T953 404 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 MFSD6LQ8IWD5 586 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 ZMYND19Q96E35 227 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 PRRT1Q99946 306 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 CSNK1G3Q9Y6M4 447 aa11.54□□□□□ -0.56
NPLOC4-202ENST00000374747 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 CASC3O15234 703 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 HPGDSO60760 199 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 APBB3O95704 486 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 UBBP0CG47 229 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 UBCP0CG48 685 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 CD6P30203 668 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 TNFSF8P32971 234 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 SIM1P81133 766 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 TATDN3Q17R31 274 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 BCL7AQ4VC05 210 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 ZNF704Q6ZNC4 412 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 SYNPRQ8TBG9 265 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 MS4A4EQ96PG1 132 aa11.53□□□□□ -0.56
NPLOC4-202ENST00000374747 PELI2Q9HAT8 420 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms