RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 AIREO43918 545 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 OR10H3O60404 316 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 RAD1O60671 282 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 VAMP5O95183 116 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 F10P00742 488 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 PDYNP01213 254 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 HIST1H2AGP0C0S8 130 aaPredicted RBP7.7□□□□□ -1.18
GARNL3-201ENST00000373386 HIST1H2ADP20671 130 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 PKIAP61925 76 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 MAB21L1Q13394 359 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 SF1Q15637 639 aaKnown RBP7.7□□□□□ -1.18
GARNL3-201ENST00000373386 DUOXA1Q1HG43 343 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 TCTN1Q2MV58 587 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 METAP1DQ6UB28 335 aaPredicted RBP7.7□□□□□ -1.18
GARNL3-201ENST00000373386 GPR137CQ8N3F9 429 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 AMER2Q8N7J2 671 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 OR4C15Q8NGM1 316 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 OR13C2Q8NGS9 318 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 HIST1H2AHQ96KK5 128 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 FAM210BQ96KR6 192 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 INTS14Q96SY0 518 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 HIST1H2AJQ99878 128 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 H2AFJQ9BTM1 129 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 REEP1Q9H902 201 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 BCO1Q9HAY6 547 aa7.7□□□□□ -1.18
GARNL3-201ENST00000373386 FOXD3Q9UJU5 478 aaPredicted RBP7.7□□□□□ -1.18
GARNL3-201ENST00000373386 GDF2Q9UK05 429 aaPredicted RBP7.7□□□□□ -1.18
GARNL3-201ENST00000373386 PRR23D1E9PI22 279 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 RFXANKO14593 260 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 APOC3P02656 99 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 SRPRAP08240 638 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PRR23D2P0DMB1 279 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 IRF1P10914 325 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PTNP21246 168 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 CA5AP35218 305 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 RGS6P49758 472 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 LUMP51884 338 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ITGA1P56199 1179 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 POLR2LP62875 67 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 TBCEQ15813 527 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PLA1AQ53H76 456 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 COLEC12Q5KU26 742 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 FAHD1Q6P587 224 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 DOK6Q6PKX4 331 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 AHSA2Q719I0 299 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ANKRD33Q7Z3H0 272 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 APCDD1Q8J025 514 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 C10orf111Q8N326 155 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 GPR26Q8NDV2 337 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 OR5T3Q8NGG3 340 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 OR56A3Q8NH54 315 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 THAP3Q8WTV1 239 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 WBP1Q96G27 269 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PEX11GQ96HA9 241 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 MS4A3Q96HJ5 214 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 UCN2Q96RP3 112 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 INPP5KQ9BT40 448 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 MIR1-1HGQ9H1L0 117 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 CERS4Q9HA82 394 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 METTL1Q9UBP6 276 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 TCFL5Q9UL49 500 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 COLQQ9Y215 455 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PNMA8CA0A1B0GUJ8 204 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 SLCO2B1O94956 709 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ALPPP05187 535 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ERCC1P07992 297 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 SDC1P18827 310 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 GTF2E2P29084 291 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 CTSKP43235 329 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ALDH3B1P43353 468 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 B4GALNT1Q00973 533 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 NHLH1Q02575 133 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PTSQ03393 145 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PRKCDQ05655 676 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ARHGEF7Q14155 803 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 LAPTM4AQ15012 233 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 SMN1Q16637 294 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 TATDN3Q17R31 274 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 C9orf64Q5T6V5 341 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 FRG2Q64ET8 278 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 UBE2R2Q712K3 238 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 CBLL1Q75N03 491 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 BHLHA15Q7RTS1 189 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 NLGN4XQ8N0W4 816 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 WFDC5Q8TCV5 224 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 SELENOMQ8WWX9 145 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 CLP1Q92989 425 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 PYCR2Q96C36 320 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 NECAB3Q96P71 396 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 FRG2BQ96QU4 278 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 RHNO1Q9BSD3 238 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 NXF2Q9GZY0 626 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ZBTB20Q9HC78 741 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 TCF7L1Q9HCS4 588 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 MRPL17Q9NRX2 175 aaKnown RBP7.69□□□□□ -1.18
GARNL3-201ENST00000373386 ARL15Q9NXU5 204 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 RNF6Q9Y252 685 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 IRAK3Q9Y616 596 aa7.69□□□□□ -1.18
GARNL3-201ENST00000373386 SLC5A10A0PJK1 596 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms