RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CCDC74AQ96AQ1 378 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SCMH1Q96GD3 660 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MAP6Q96JE9 813 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 FNDC11Q9BVV2 318 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 HDHD5Q9BXW7 423 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MED28Q9H204 178 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 KCNN2Q9H2S1 579 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SPNS1Q9H2V7 528 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 BCL2L10Q9HD36 194 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 WDR70Q9NW82 654 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 EMC3Q9P0I2 261 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 P2RX2Q9UBL9 471 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC23A1Q9UHI7 598 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 FBXW2Q9UKT8 454 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 LIPT1Q9Y234 373 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 ASF1AQ9Y294 204 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 EXOGQ9Y2C4 368 aaKnown RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 U3KQ87 197 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PTPRZ1P23471 2315 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 TDRD6O60522 2096 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 A0A1B0GVI7 797 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ISM1B1AKI9 464 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 CASC3O15234 703 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 CHP2O43745 196 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 C1orf105O95561 183 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 RAF1P04049 648 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 IL3P08700 152 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 IGFBP1P08833 259 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 UBL4AP11441 157 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 CSRP1P21291 193 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 PRKACBP22694 351 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 MMP11P24347 488 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ACADLP28330 430 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 RBMS1P29558 406 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 SSTR4P31391 388 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 UQCRC1P31930 480 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC1A3P43003 542 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 RNF144AP50876 292 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ANXA11P50995 505 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 TBPL1P62380 186 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 UBE2IP63279 158 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 SIM1P81133 766 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 TAP2Q03519 686 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 RGS1Q08116 209 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 GNA13Q14344 377 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 P2RY14Q15391 338 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 KLHL12Q53G59 568 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 TOR2AQ5JU69 321 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 OR2G6Q5TZ20 316 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 PRAMEF8Q5VWM4 474 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 PRAMEF7Q5VXH5 474 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ADNP2Q6IQ32 1131 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ACSM5Q6NUN0 579 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 TMIGD1Q6UXZ0 262 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 WDR53Q7Z5U6 358 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ZER1Q7Z7L7 766 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 C17orf82Q86X59 251 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 IQCF2Q8IXL9 164 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 GPALPP1Q8IXQ4 340 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ADGRF3Q8IZF5 1079 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 KRT78Q8N1N4 520 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 MORN4Q8NDC4 146 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 OR4K5Q8NGD3 323 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 OR8H1Q8NGG4 311 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 OR5M3Q8NGP4 307 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 OR5AR1Q8NGP9 310 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 NEIL3Q8TAT5 605 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF431Q8TF32 576 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC5A11Q8WWX8 675 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC38A3Q99624 504 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 C7orf50Q9BRJ6 194 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ANKRD19PQ9H560 264 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 PRM3Q9NNZ6 103 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 CYSLTR2Q9NS75 346 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 ACSS1Q9NUB1 689 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 SEC14L3Q9UDX4 400 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 CLCA2Q9UQC9 943 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 NUBP2Q9Y5Y2 271 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 COLEC10Q9Y6Z7 277 aa10.65□□□□□ -0.7
TSPAN1-201ENST00000372003 GABRPO00591 440 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 NUDT21O43809 227 aaKnown RBP10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 TGFB1P01137 390 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 IFNA7P01567 189 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 IGHA1P01876 353 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 KLK1P06870 262 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 ANXA3P12429 323 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 SDHBP21912 280 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 STOMP27105 288 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 PPP2R1BP30154 601 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 TALDO1P37837 337 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 FASLGP48023 281 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 EPHA4P54764 986 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 OR1D5P58170 312 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 GPR176Q14439 515 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 TRAM1Q15629 374 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 PRSS53Q2L4Q9 553 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 AMZ1Q400G9 498 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms