RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 IFNW1P05000 195 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 CELA2AP08217 269 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ARAFP10398 606 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 COL8A1P27658 744 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 TPP2P29144 1249 aaPredicted RBP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 CHI3L1P36222 383 aaPredicted RBP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 EFNA3P52797 238 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ARFIP1P53367 373 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 RAB38P57729 211 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 SLC26A5P58743 744 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 RPS3AP61247 264 aaKnown RBP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 SNRPNP63162 240 aaKnown RBP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 BTN3A2P78410 334 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 HYAL2Q12891 473 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 AQP6Q13520 282 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 HEPACAMQ14CZ8 416 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 NDUFA5Q16718 116 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ANKDD1AQ495B1 522 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 IQCCQ4KMZ1 466 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 FAM71E1Q6IPT2 247 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 REEP3Q6NUK4 255 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 H3F3CQ6NXT2 135 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 SLC46A3Q7Z3Q1 461 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF595Q8IYB9 648 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ENTHD1Q8IYW4 607 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 CA13Q8N1Q1 262 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 HORMAD2Q8N7B1 307 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ST6GALNAC3Q8NDV1 305 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 HUS1BQ8NHY5 278 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 CHAC2Q8WUX2 184 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 MS4A6EQ96DS6 147 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 KCNC2Q96PR1 638 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF607Q96SK3 696 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 MTERF1Q99551 399 aaKnown RBP9.59□□□□□ -0.87
COL5A1-202ENST00000371820 FEVQ99581 238 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 SLC35A5Q9BS91 424 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 RHBGQ9H310 441 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 DSN1Q9H410 356 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 KLHL31Q9H511 634 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 C3orf14Q9HBI5 128 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 PRTFDC1Q9NRG1 225 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 STMN3Q9NZ72 180 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 NDUFAF4Q9P032 175 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 ADAM29Q9UKF5 820 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 POLEQ07864 2286 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 CPAMD8Q8IZJ3 1885 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 J3QRK9 145 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 MAGEB3O15480 346 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 PRAMEF2O60811 474 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 MITFO75030 526 aaPredicted RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 WBP4O75554 376 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 UPK1BO75841 260 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 WDPCPO95876 746 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 B3GALT4O96024 378 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 ADAP00813 363 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 IFNA8P32881 189 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 ETV6P41212 452 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 HSD17B7P56937 341 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 RPS13P62277 151 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 SNRPGP62308 76 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 SPIBQ01892 262 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 DDX39BQ13838 428 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 MLC1Q15049 377 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 TMEM35AQ53FP2 167 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 ACER2Q5QJU3 275 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 BHLHB9Q6PI77 547 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 AHSA2Q719I0 299 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 TAGAPQ8N103 731 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 FAM98AQ8NCA5 519 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 OR4C15Q8NGM1 316 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 SETD6Q8TBK2 473 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 ZNF675Q8TD23 568 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 GRHL3Q8TE85 626 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 C16orf78Q8WTQ4 265 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 GGHQ92820 318 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 TSLPQ969D9 159 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 NEURL2Q9BR09 285 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 CCDC32Q9BV29 185 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 EBPLQ9BY08 206 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 MS4A8Q9BY19 250 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 SLIRPQ9GZT3 109 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 TRIM45Q9H8W5 580 aaPredicted RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 VNN3Q9NY84 501 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 PLA2G3Q9NZ20 509 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 NPAP1Q9NZP6 1156 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 UTS2RQ9UKP6 389 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 RPL36Q9Y3U8 105 aaKnown RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 PCDHGB6Q9Y5F9 930 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 CORINQ9Y5Q5 1042 aa9.58□□□□□ -0.88
COL5A1-202ENST00000371820 GPC6Q9Y625 555 aaPredicted RBP9.58□□□□□ -0.88
COL5A1-202ENST00000371820 CREBBPQ92793 2442 aa9.57□□□□□ -0.88
COL5A1-202ENST00000371820 DOCK10Q96BY6 2186 aa9.57□□□□□ -0.88
COL5A1-202ENST00000371820 SCN3AQ9NY46 2000 aa9.57□□□□□ -0.88
COL5A1-202ENST00000371820 IGKV3D-11A0A0A0MRZ8 115 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms