RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 PIK3CBP42338 1070 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 SLC15A1P46059 708 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 PIK3CGP48736 1102 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 CLK3P49761 638 aaKnown RBP13.74□□□□□ -0.21
LMO4-201ENST00000370542 RAB8AP61006 207 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
LMO4-201ENST00000370542 ZNF630Q2M218 657 aaPredicted RBP13.74□□□□□ -0.21
LMO4-201ENST00000370542 AP5B1Q2VPB7 878 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 ARMCX4Q5H9R4 360 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 GDPD3Q7L5L3 318 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 ZNF367Q7RTV3 350 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 GALNTL5Q7Z4T8 443 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 CCDC190Q86UF4 302 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 LIX1LQ8IVB5 337 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 MMP21Q8N119 569 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 OR2T11Q8NH01 316 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 OR10A6Q8NH74 314 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 ADAMTS18Q8TE60 1221 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 GAL3ST3Q96A11 431 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 MS4A6EQ96DS6 147 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 WDR34Q96EX3 536 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 GABARAPL3Q9BY60 117 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 C6orf62Q9GZU0 229 aaPredicted RBP13.74□□□□□ -0.21
LMO4-201ENST00000370542 IL1RAPQ9NPH3 570 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 POLE4Q9NR33 117 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 DDX28Q9NUL7 540 aaKnown RBP13.74□□□□□ -0.21
LMO4-201ENST00000370542 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 EHD3Q9NZN3 535 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 CD274Q9NZQ7 290 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 LRFN1Q9P244 771 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 KIF17Q9P2E2 1029 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 N6AMT1Q9Y5N5 214 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 MAGED1Q9Y5V3 778 aaPredicted RBP13.74□□□□□ -0.21
LMO4-201ENST00000370542 TRBV5-3A0A0A0MS03 114 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 A8MVJ9 347 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 PRSS44E7EML9 344 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 PPP6CO00743 305 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 TAPBPO15533 448 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 NDUFB5O43674 189 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 NME2P1O60361 137 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 PRAMEF4O60810 478 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 CLEC3AO75596 197 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 SLITRK5O94991 958 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 OR4F21O95013 312 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 SERPINA1P01009 418 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 G6PDP11413 515 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 MAOAP21397 527 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 NME2P22392 152 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 KRT20P35900 424 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 GDF5P43026 501 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 NR4A2P43354 598 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
LMO4-201ENST00000370542 LSM3P62310 102 aaKnown RBP13.73□□□□□ -0.21
LMO4-201ENST00000370542 ADORA2A-AS1P86434 159 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
LMO4-201ENST00000370542 RUNX2Q13950 521 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 C3AR1Q16581 482 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 DUSP7Q16829 419 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 TIGD6Q17RP2 521 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 ATAD3CQ5T2N8 411 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 PRAMEF9Q5VWM5 478 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 MRGPRGQ86SM5 289 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 CLIP4Q8N3C7 705 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 C1orf52Q8N6N3 182 aaKnown RBP13.73□□□□□ -0.21
LMO4-201ENST00000370542 QRFPRQ96P65 431 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 EPYCQ99645 322 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 CPPED1Q9BRF8 314 aaPredicted RBP13.73□□□□□ -0.21
LMO4-201ENST00000370542 PIF1Q9H611 641 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 REEP1Q9H902 201 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 KLHL1Q9NR64 748 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 KRT84Q9NSB2 600 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 FKBP14Q9NWM8 211 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 VAPAQ9P0L0 249 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 USP22Q9UPT9 525 aa13.73□□□□□ -0.21
LMO4-201ENST00000370542 LRRC14BA6NHZ5 514 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 TGFBR3LH3BV60 316 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 GUCY1B2O75343 617 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 SLC25A12O75746 678 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 MFN2O95140 757 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 FABP3P05413 133 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 CDK1P06493 297 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 CYB561P49447 251 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 HSD17B7P56937 341 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 DGCR6Q14129 220 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 C18orf21Q32NC0 220 aaPredicted RBP13.72□□□□□ -0.21
LMO4-201ENST00000370542 RNFT1Q5M7Z0 435 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 TIGD3Q6B0B8 471 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 FAHD1Q6P587 224 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.72□□□□□ -0.21
LMO4-201ENST00000370542 SERPINA11Q86U17 422 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 RNF130Q86XS8 419 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 GALNT12Q8IXK2 581 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 TCAIMQ8N3R3 496 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 CDYL2Q8N8U2 506 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 POGLUT1Q8NBL1 392 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 B3GNT7Q8NFL0 401 aa13.72□□□□□ -0.21
LMO4-201ENST00000370542 NANOS1Q8WY41 292 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms