RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KCNJ10P78508 379 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 GXYLT1Q4G148 440 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 RABL3Q5HYI8 236 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 MRPL2Q5T653 305 aaKnown RBP13.44□□□□□ -0.26
COL9A1-204ENST00000370496 REEP3Q6NUK4 255 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 MTFR2Q6P444 385 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 ARPINQ7Z6K5 226 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 CCDC197Q8NCU1 140 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 HIPK4Q8NE63 616 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 FAM71CQ8NEG0 241 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 OR5W2Q8NH69 310 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 SMPDL3BQ92485 455 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 RELTQ969Z4 430 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 ZG16BQ96DA0 208 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 TIMP4Q99727 224 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 ECSITQ9BQ95 431 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 LAT2Q9GZY6 243 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 BCL2L10Q9HD36 194 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 PCNX3Q9H6A9 2034 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 OR2M5A3KFT3 312 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 PGM3O95394 542 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 THBS1P07996 1170 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 GABRA1P14867 456 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 UQCRBP14927 111 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 PGCP20142 388 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 AQP1P29972 269 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 PRDX6P30041 224 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 PGM1P36871 562 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 B3GALT5-AS1P59052 145 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 SRYQ05066 204 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 RBBP4Q09028 425 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 FOXF1Q12946 379 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 ART3Q13508 389 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 GLYR1Q49A26 553 aaPredicted RBP13.43□□□□□ -0.26
COL9A1-204ENST00000370496 EMC4Q5J8M3 183 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 RNF220Q5VTB9 566 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 AP1ARQ63HQ0 302 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF836Q6ZNA1 936 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 SERPINA11Q86U17 422 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 VRK2Q86Y07 508 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 ANKS4BQ8N8V4 417 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 RNF145Q96MT1 663 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 KLHDC3Q9BQ90 382 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 SPATA9Q9BWV2 254 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 PRDM14Q9GZV8 571 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 PIF1Q9H611 641 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 ARMC7Q9H6L4 198 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 EFCAB1Q9HAE3 211 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 EXOSC3Q9NQT5 275 aaKnown RBP13.43□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF232Q9UNY5 417 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 MEMO1Q9Y316 297 aa13.43□□□□□ -0.26
COL9A1-204ENST00000370496 C7orf72A4D263 438 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 E9PLN8 166 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 LINC01387J3KSC0 135 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 NDUFAB1O14561 156 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 SEC14L5O43304 696 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 BCAS1O75363 584 aaPredicted RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 LINGO3P0C6S8 592 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 PABPC4LP0CB38 370 aaKnown RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ETS2P15036 469 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ME2P23368 584 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 RYKP34925 604 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 PCGF2P35227 344 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 EIF1P41567 113 aaKnown RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 SLC6A8P48029 635 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 LHX2P50458 406 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 QPRTQ15274 297 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ADRM1Q16186 407 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF311Q5JNZ3 666 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 C1orf185Q5T7R7 199 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 NET1Q7Z628 596 aaPredicted RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 PTOV1Q86YD1 416 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 SLC30A8Q8IWU4 369 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ZZZ3Q8IYH5 903 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ULK2Q8IYT8 1036 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 GTPBP8Q8N3Z3 284 aaPredicted RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 MEIOBQ8N635 442 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 CNOT9Q92600 299 aaKnown RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ARSGQ96EG1 525 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 CCDC120Q96HB5 630 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF607Q96SK3 696 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 VKORC1Q9BQB6 163 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 SPATA5L1Q9BVQ7 753 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 STOML1Q9UBI4 398 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 IFT52Q9Y366 437 aa13.42□□□□□ -0.26
COL9A1-204ENST00000370496 GPC6Q9Y625 555 aaPredicted RBP13.42□□□□□ -0.26
COL9A1-204ENST00000370496 CDHR4A6H8M9 788 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 PEPDP12955 493 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 ELK4P28324 431 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 PTGER4P35408 488 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 CPA2P48052 419 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 STARP49675 285 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 SF3B4Q15427 424 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL9A1-204ENST00000370496 TOMM34Q15785 309 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-204ENST00000370496 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 TMEM44Q2T9K0 475 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms