RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SGCEO43556 437 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 EEDO75530 441 aaKnown RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 WBP4O75554 376 aaKnown RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 PCCBP05166 539 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 RAB40ALP0C0E4 278 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 SPINK2P20155 84 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 OGNP20774 298 aaKnown RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 PBLDP30039 288 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 CCT3P49368 545 aaKnown RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 RAG2P55895 527 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 PON3Q15166 354 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 CPZQ66K79 652 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF324BQ6AW86 544 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF367Q7RTV3 350 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 IFNEQ86WN2 208 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 KRT78Q8N1N4 520 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 NANPQ8TBE9 248 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 C3orf30Q96M34 536 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 NUDT22Q9BRQ3 303 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 BEX2Q9BXY8 128 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 MS4A7Q9GZW8 240 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-204ENST00000369530 NANSQ9NR45 359 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 SPHK1Q9NYA1 384 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 WWOXQ9NZC7 414 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 GIMAP2Q9UG22 337 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 MGAT4AQ9UM21 535 aa6.38□□□□□ -1.39
CSDE1-204ENST00000369530 MEIKINA0A087WXM9 373 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 LOC102723996A0A087X1L8 192 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 BLOC1S5-TXNDC5H3BN57 136 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 TNFRSF21O75509 655 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SLC25A14O95258 325 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 LINC00032P0C843 101 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ATP1B2P14415 290 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CBR1P16152 277 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CAPN3P20807 821 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 PDHA2P29803 388 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 MAGEA2P43356 314 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 PIK3CGP48736 1102 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 RGS6P49758 472 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 NOVA1P51513 510 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 NR0B1P51843 470 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 HOXC5Q00444 222 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CACNG1Q06432 222 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF155Q12901 538 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 RAPSNQ13702 412 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 GPR68Q15743 365 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZIK1Q3SY52 487 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ATRAIDQ6UW56 229 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SBSNQ6UWP8 590 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 OR8H2Q8N162 312 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZDHHC1Q8WTX9 485 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 EEF1AKMT1Q8WVE0 214 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 APH1BQ8WW43 257 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 HOXB13Q92826 284 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 NSUN5Q96P11 429 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZBTB18Q99592 522 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 AARSD1Q9BTE6 412 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 TMPRSS13Q9BYE2 586 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 BARHL1Q9BZE3 327 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 OPA3Q9H6K4 179 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 POPDC3Q9HBV1 291 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SDR39U1Q9NRG7 319 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 RASSF1Q9NS23 344 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 FTSJ1Q9UET6 329 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 DOCK10Q96BY6 2186 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 MGAT4DA6NG13 374 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 GPR37O15354 613 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 XPNPEP2O43895 674 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 PRKRAO75569 313 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CFDP00746 253 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ITGB2P05107 769 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 LCKP06239 509 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 NID1P14543 1247 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF37AP17032 561 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SRSF6Q13247 344 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 TECRLQ5HYJ1 363 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 RNLSQ5VYX0 342 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 PLET1Q6UQ28 207 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 TMPRSS11AQ6ZMR5 421 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CLDN22Q8N7P3 220 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 OR4F6Q8NGB9 312 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 C9orf43Q8TAL5 461 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 UBTD2Q8WUN7 234 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ASB11Q8WXH4 323 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 KCNA7Q96RP8 456 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZPBPQ9BS86 351 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 KATNB1Q9BVA0 655 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CLEC4MQ9H2X3 399 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 PPP1R3EQ9H7J1 279 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 IGHV5-51A0A0C4DH38 117 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 FAM74A7A6NL05 159 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SLC31A1O15431 190 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 GGT1P19440 569 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 STAT5AP42229 794 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 HERVK_113P63132 956 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 GPR18Q14330 331 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 DEFB133Q30KQ1 61 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 FAM74A3Q4VXF1 159 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms