RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 CLIP4Q8N3C7 705 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 BCORP1Q8N888 145 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 B3GNT7Q8NFL0 401 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 TBC1D15Q8TC07 691 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 PHF10Q8WUB8 498 aaKnown RBP11.13□□□□□ -0.63
USF1-203ENST00000368021 MR1Q95460 341 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 TXNDC15Q96J42 360 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 PRRC1Q96M27 445 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 NUDT9Q9BW91 350 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 ANKRD60Q9BZ19 345 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 AKIRIN1Q9H9L7 192 aaPredicted RBP11.13□□□□□ -0.63
USF1-203ENST00000368021 NMNAT1Q9HAN9 279 aaPredicted RBP11.13□□□□□ -0.63
USF1-203ENST00000368021 SMURF2Q9HAU4 748 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 TNFRSF10DQ9UBN6 386 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 KCNE5Q9UJ90 142 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 MRTO4Q9UKD2 239 aaKnown RBP11.13□□□□□ -0.63
USF1-203ENST00000368021 A4GNTQ9UNA3 340 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 PCDHGA3Q9Y5H0 932 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 C2orf92A0A1B0GVN3 265 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 A0A1W2PRQ8 180 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ISPDA4D126 451 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 FAM25AB3EWG3 89 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 FAM25CB3EWG5 89 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 FAM25GB3EWG6 89 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 PEX12O00623 359 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 TO15178 435 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 TLX3O43711 291 aaPredicted RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 TSPAN9O75954 239 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 SNAP29O95721 258 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 IGKV1D-16P01601 117 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 PRKACGP22612 351 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 LCN1P31025 176 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 IFNA8P32881 189 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 RAD23AP54725 363 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 CDC20Q12834 499 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 DGCR6Q14129 220 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 GANABQ14697 944 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 NCF4Q15080 339 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ZNF141Q15928 474 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ST3GAL2Q16842 350 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 MICAQ29983 383 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 IDO2Q6ZQW0 420 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 CPEB2Q7Z5Q1 589 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 ZAR1Q86SH2 424 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 CHERPQ8IWX8 916 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 DHRSXQ8N5I4 330 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 FGF11Q92914 225 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 SNX18Q96RF0 628 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 LPAR4Q99677 370 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 NXF5Q9H1B4 397 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 SP140LQ9H930 580 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 RLIMQ9NVW2 624 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 NPAP1Q9NZP6 1156 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 FOXJ2Q9P0K8 574 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 TMEFF2Q9UIK5 374 aaPredicted RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 LOC102723996A0A087X1L8 192 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 CENPVL1A0A0U1RR11 272 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 C9orf172C9J069 976 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 HS6ST1O60243 411 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 STK17BO94768 372 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 IL33O95760 270 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 DLGAP3O95886 979 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 H1F0P07305 194 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 ANXA8P13928 327 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 IGFBP5P24593 272 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 CAPGP40121 348 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 DAPP51397 102 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ATP12AP54707 1039 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 RGS8P57771 180 aaPredicted RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 FOXL2P58012 376 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 NPTX1Q15818 432 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 EXOC3L2Q2M3D2 409 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 MRPL2Q5T653 305 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 TMEM164Q5U3C3 297 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 HLA-DQA1Q5Y7H0 255 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 FAM199XQ6PEV8 388 aaPredicted RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 CMIPQ8IY22 773 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 OFCC1Q8IZS5 231 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ZNF441Q8N8Z8 693 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 GALNT6Q8NCL4 622 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 APCDD1LQ8NCL9 501 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 OR52J3Q8NH60 311 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 WDR77Q9BQA1 342 aaPredicted RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 POLR2J2Q9GZM3 115 aaKnown RBP11.12□□□□□ -0.63
USF1-203ENST00000368021 WWTR1Q9GZV5 400 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 HOXD1Q9GZZ0 328 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms