RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PLAURQ03405 335 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 SNTB1Q13884 538 aaKnown RBP13.22□□□□□ -0.29
SF3B5-201ENST00000367569 POMZP3Q6PJE2 187 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 BLOC1S3Q6QNY0 202 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 DMRTC2Q8IXT2 367 aaPredicted RBP13.22□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF619Q8N2I2 560 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 RELL2Q8NC24 303 aaPredicted RBP13.22□□□□□ -0.29
SF3B5-201ENST00000367569 ATP6V1C2Q8NEY4 427 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 ZG16BQ96DA0 208 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 TPT1P8Q9HAU6 139 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 SLC25A37Q9NYZ2 338 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 AKAP6Q13023 2319 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 SERINC4A6NH21 518 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 FAM47E-STBD1D6RA91 191 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 EIF1AYO14602 144 aaKnown RBP13.21□□□□□ -0.29
SF3B5-201ENST00000367569 KRT75O95678 551 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 AK1P00568 194 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 CSTAP01040 98 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 HOXD4P09016 255 aaPredicted RBP13.21□□□□□ -0.29
SF3B5-201ENST00000367569 TROVE2P10155 538 aaKnown RBP eCLIP13.21□□□□□ -0.29
SF3B5-201ENST00000367569 NR2F1P10589 423 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 CHMP24386 653 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 LCN1P31025 176 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 ATP4BP51164 291 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 DSTNP60981 165 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 FOXF2Q12947 444 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 SKP2Q13309 424 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 MAPK11Q15759 364 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 MSANTD1Q6ZTZ1 278 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 GRAMD2AQ8IUY3 354 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 LACC1Q8IV20 430 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 FIG4Q92562 907 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 MAL2Q969L2 176 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 DNAJA3Q96EY1 480 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 PIGQQ9BRB3 760 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 PINK1Q9BXM7 581 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 NMUR2Q9GZQ4 415 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 HOXD1Q9GZZ0 328 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 SLC38A1Q9H2H9 487 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 IKZF5Q9H5V7 419 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 SLC52A3Q9NQ40 469 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
SF3B5-201ENST00000367569 ICAM5Q9UMF0 924 aa13.21□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF469Q96JG9 3925 aaPredicted RBP13.2□□□□□ -0.3
SF3B5-201ENST00000367569 A0A096LPI6 279 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 AHRRA9YTQ3 701 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 H3BNH8 94 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 ZNF264O43296 627 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 EPPINO95925 133 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 TGM6O95932 706 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 AGR2O95994 175 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 CPN1P15169 458 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 RYKP34925 604 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 SFTPDP35247 375 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 MRPL19P49406 292 aaKnown RBP13.2□□□□□ -0.3
SF3B5-201ENST00000367569 P2RX1P51575 399 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 ZNF136P52737 540 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 GYS2P54840 703 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 ZNF141Q15928 474 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 TMEM44Q2T9K0 475 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 RIPPLY2Q5TAB7 128 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 NSUN5P2Q63ZY6 315 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 GGNQ86UU5 652 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 MISPQ8IVT2 679 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 MEIOBQ8N635 442 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 FBXO27Q8NI29 283 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 INTS12Q96CB8 462 aaKnown RBP13.2□□□□□ -0.3
SF3B5-201ENST00000367569 DTNBP1Q96EV8 351 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 TMEM19Q96HH6 336 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 VAPAQ9P0L0 249 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 CLCF1Q9UBD9 225 aa13.2□□□□□ -0.3
SF3B5-201ENST00000367569 EEF1E1-BLOC1S5C9J1V9 151 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 CLIC1O00299 241 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 AP3D1O14617 1153 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 TNFSF11O14788 317 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 EEF1E1O43324 174 aaKnown RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 MDH1P40925 334 aaKnown RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 EIF1AXP47813 144 aaKnown RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 ARFIP2P53365 341 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 SIRPAP78324 504 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 SELPLGQ14242 412 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 FGFBP1Q14512 234 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 QPRTQ15274 297 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 SPNS3Q6ZMD2 512 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 P4HA3Q7Z4N8 544 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 DHDDSQ86SQ9 333 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 RETREG3Q86VR2 466 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 VRK2Q86Y07 508 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 GTPBP8Q8N3Z3 284 aaPredicted RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 ZNF559Q9BR84 538 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 THUMPD3Q9BV44 507 aaKnown RBP13.19□□□□□ -0.3
SF3B5-201ENST00000367569 FAM107BQ9H098 131 aa13.19□□□□□ -0.3
SF3B5-201ENST00000367569 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms