RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SGCAQ16586 387 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 MANEALQ5VSG8 457 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 OR2A2Q6IF42 318 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ADAM5Q6NVV9 412 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF101Q8IZC7 436 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 FRZBQ92765 325 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ADGRG7Q96K78 797 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 MFRPQ9BY79 579 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 CCM2LQ9NUG4 571 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ABRACLQ9P1F3 81 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 LGALS13Q9UHV8 139 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 INTS6Q9UL03 887 aaKnown RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 CCDC88AQ3V6T2 1871 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 TTC24A2A3L6 582 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 H7C417 338 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 RAD1O60671 282 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 UTS2O95399 124 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 DIRAS3O95661 229 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 GJA5P36382 358 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 XKP51811 444 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 TNFRSF17Q02223 184 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 MPPED2Q15777 294 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 HNRNPA1L2Q32P51 320 aaKnown RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 EARS2Q5JPH6 523 aaKnown RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 PLPP6Q8IY26 295 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ZDHHC14Q8IZN3 488 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ACVR1CQ8NER5 493 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 OR13C2Q8NGS9 318 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 CNTNAP3BQ96NU0 1288 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 DHRS4Q9BTZ2 278 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 LRRC3Q9BY71 257 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 FZD4Q9ULV1 537 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 BOLA1Q9Y3E2 137 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ATP23Q9Y6H3 246 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 WNK3Q9BYP7 1800 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 LOC102725191A0A1B0GVB3 256 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ANKRD30BLA7E2S9 258 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 MAGEB17A8MXT2 336 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 M0R2Z0 102 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 RAB29O14966 203 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 SCO2O43819 266 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 IDH3AP50213 366 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM115Q12893 351 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 LCP2Q13094 533 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 KIAA0141Q14154 515 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 CRB2Q5IJ48 1285 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 OSTM1Q86WC4 334 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF547Q8IVP9 402 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 OR6K6Q8NGW6 343 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 TLCD1Q96CP7 247 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 MENTQ9BUN1 341 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 KCNMB3Q9NPA1 279 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 KDELR3O43731 214 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 SNRNP70P08621 437 aaKnown RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 G6PDP11413 515 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 HOXA4Q00056 320 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 SLX4IPQ5VYV7 408 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 C5orf46Q6UWT4 87 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 CARM1Q86X55 608 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 BEST3Q8N1M1 668 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 TCEANCQ8N8B7 351 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM185AQ8NFB2 350 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 IGSF8Q969P0 613 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 M0R143 59 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 SRPX2O60687 465 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ITGBL1O95965 494 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 C8orf89P0DMQ9 161 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ADRB3P13945 408 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CAMLGP49069 296 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 RAB13P51153 203 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 PRKXP51817 358 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 NTHL1P78549 312 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 GK3PQ14409 553 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 LGI4Q8N135 537 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 EIF4E3Q8N5X7 224 aaKnown RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 NFKBIDQ8NI38 313 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ORAI3Q9BRQ5 295 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 AK6Q9Y3D8 172 aaKnown RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 C4AP0C0L4 1744 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 MYH2Q9UKX2 1941 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 A6NHS1 94 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CREBL2O60519 120 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 TTRP02766 147 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 APEHP13798 732 aaKnown RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 EDNRAP25101 427 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ACVR2AP27037 513 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 STK19P49842 368 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CLCN4P51793 760 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 HERV-K104P61576 105 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 DCAF7P61962 342 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 HSD11B2P80365 405 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 OR5I1Q13606 314 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 SLBPQ14493 270 aaKnown RBP eCLIP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 BEST4Q8NFU0 473 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 RDH12Q96NR8 316 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms