RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 BDH1Q02338 343 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 FAM151AQ8WW52 585 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 SLC13A3Q8WWT9 602 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 CELF6Q96J87 481 aaKnown RBP2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 MCHR1Q99705 422 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 SRXN1Q9BYN0 137 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 PLA2G2FQ9BZM2 168 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 MAGT1Q9H0U3 335 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 ATG10Q9H0Y0 220 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 ZDHHC11Q9H8X9 412 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 ROPN1Q9HAT0 212 aaPredicted RBP2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 LPAR2Q9HBW0 351 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 PLLPQ9Y342 182 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 TMX2-CTNND1H3BSU7 103 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 DUX1O43812 170 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 HCN1O60741 890 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ALPPP05187 535 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ALPPL2P10696 532 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ETS1P14921 441 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ZNF44P15621 663 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 PRPS1P60891 318 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 OSTNP61366 133 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 PTGES3Q15185 160 aaKnown RBP2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 TIGITQ495A1 244 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 NEK5Q6P3R8 708 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ERASQ7Z444 233 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ZNF540Q8NDQ6 660 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 OR56B1Q8NGI3 324 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 PAQR8Q8TEZ7 354 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 VSTM2LQ96N03 204 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 OR5B2Q96R09 309 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 TBCDQ9BTW9 1192 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 POLR2J2Q9GZM3 115 aaKnown RBP2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 POLR2J3Q9H1A7 115 aaKnown RBP2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 IL19Q9UHD0 177 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ZNF225Q9UK10 706 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 SMC3Q9UQE7 1217 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 UGT2A1Q9Y4X1 527 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 AP4B1Q9Y6B7 739 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 ABCC9O60706 1549 aa2.66□□□□□ -1.98
RNU4-28P-201ENST00000364739 A0A0G2JRQ6 117 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 RRASP10301 218 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 THRBP10828 461 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 CCR6P51684 374 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 MAP2K1Q02750 393 aaPredicted RBP2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 WASHC5Q12768 1159 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 CUL1Q13616 776 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 NSDHLQ15738 373 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 SYPL1Q16563 259 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 NDUFA9Q16795 377 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 ADPRMQ3LIE5 342 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 WDR74Q6RFH5 385 aaPredicted RBP2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 RNF165Q6ZSG1 346 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 VRK2Q86Y07 508 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 ELMOD2Q8IZ81 293 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 FAM71E2Q8N5Q1 922 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 MGARPQ8TDB4 240 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 CITED1Q99966 193 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 FEM1AQ9BSK4 669 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 VCXQ9H320 206 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 ACTR8Q9H981 624 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 ATP6V1HQ9UI12 483 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 PRPF19Q9UMS4 504 aaKnown RBP2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 FOXJ3Q9UPW0 622 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 PSG11Q9UQ72 335 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 LRP4O75096 1905 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 UBE4BO95155 1302 aa2.65□□□□□ -1.99
RNU4-28P-201ENST00000364739 GJE1A6NN92 205 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 KIF2AO00139 706 aaPredicted RBP2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 SULT2B1O00204 365 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 PCCAP05165 728 aaPredicted RBP2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 DLSTP36957 453 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 ATXN3P54252 364 aaPredicted RBP2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 PAX5Q02548 391 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 SLC10A7Q0GE19 358 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 LAGE3Q14657 143 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 FAM199XQ6PEV8 388 aaPredicted RBP2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 ZFP2Q6ZN57 461 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 NRMQ8IXM6 262 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 MDS2Q8NDY4 140 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 FAM71CQ8NEG0 241 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 BLOC1S5Q8TDH9 187 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 GIPC3Q8TF64 312 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 RAB7BQ96AH8 199 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 TESK2Q96S53 571 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 CHRDL1Q9BU40 450 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 SOHLH2Q9NX45 425 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 WRAP73Q9P2S5 460 aaPredicted RBP2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 CYTH4Q9UIA0 394 aa2.64□□□□□ -1.99
RNU4-28P-201ENST00000364739 A0A1B0GWB2 263 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 STX7O15400 261 aaKnown RBP2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 ZNF324O75467 553 aaPredicted RBP2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 F10P00742 488 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 TGFAP01135 160 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 PDHBP11177 359 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 FUT1P19526 365 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 COX7A1P24310 79 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 ARMCX2Q7L311 632 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms