RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TVP23AA6NH52 213 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 VEGFCP49767 419 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 GPLD1P80108 840 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 IRF5Q13568 498 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 CRMP1Q14194 572 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 PUS10Q3MIT2 529 aaKnown RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 LAIR1Q6GTX8 287 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 MEPCEQ7L2J0 689 aaKnown RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF527Q8NB42 609 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 SLC16A11Q8NCK7 471 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 BBS1Q8NFJ9 593 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 FOXN4Q96NZ1 517 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 CMKLR1Q99788 373 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 KCMF1Q9P0J7 381 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 COPS3Q9UNS2 423 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 ATG4BQ9Y4P1 393 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 COL4A5P29400 1685 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 A0A0B4J203 849 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 GOSR2O14653 212 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF780AO75290 641 aaPredicted RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 AIFM1O95831 613 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 C1QBP02746 253 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 SYPP08247 313 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 LEG1Q6P5S2 330 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 LRFN4Q6PJG9 635 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 DPPA4Q7L190 304 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 NRSN1Q8IZ57 195 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 ATXN7L1Q9ULK2 861 aaPredicted RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 ASB4Q9Y574 426 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 HMGN4O00479 90 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 TMPRSS11DO60235 418 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 CYB5AP00167 134 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 CCKBRP32239 447 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 GDNFP39905 211 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 KIAA1024LP59773 190 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 ELOAQ14241 798 aaKnown RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 HAGHLQ6PII5 290 aaPredicted RBP13□□□□□ -0.33
COL6A1-201ENST00000361866 NLRP8Q86W28 1048 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 CPXM2Q8N436 756 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 ZFAND1Q8TCF1 268 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 SGTBQ96EQ0 304 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 DGAT2Q96PD7 388 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 C1QTNF2Q9BXJ5 285 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 NOX3Q9HBY0 568 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 CCL27Q9Y4X3 112 aa13□□□□□ -0.33
COL6A1-201ENST00000361866 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SLC22A5O76082 557 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF888P0CJ79 500 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 AKT2P31751 481 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 OR3A2P47893 321 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ZFP36L2P47974 494 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 GXYLT1Q4G148 440 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 HBMQ6B0K9 141 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 CREB3L2Q70SY1 520 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 RNASE11Q8TAA1 199 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 TSACCQ96A04 125 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SLC6A7Q99884 636 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 MS4A8Q9BY19 250 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 PLEKHA1Q9HB21 404 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 CHST2Q9Y4C5 530 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 HEBP2Q9Y5Z4 205 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 TRBV5-4A0A0C4DH59 114 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 B4DGG1 531 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 TEAD1P28347 426 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 IL12BP29460 328 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ARHGDIBP52566 201 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 OR10A3P58181 314 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 METTL11BQ5VVY1 283 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ARHGAP11AQ6P4F7 1023 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SLC39A11Q8N1S5 342 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 FAM26EQ8N5C1 309 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ABHD4Q8TB40 342 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 TRMT2BQ96GJ1 504 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 PTCHD1Q96NR3 888 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 TBL1XR1Q9BZK7 514 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 CHST8Q9H2A9 424 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 UBQLN3Q9H347 655 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 METTL8Q9H825 291 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 HINT3Q9NQE9 182 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 RXFP3Q9NSD7 469 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ATG2BQ96BY7 2078 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ERVK-25P63136 954 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 PRDX1Q06830 199 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 C1orf61Q13536 156 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 QSOX2Q6ZRP7 698 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 NAXEQ8NCW5 288 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 OR2L5Q8NG80 312 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 LGALS14Q8TCE9 139 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 CNOT9Q92600 299 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 PDCD1LG2Q9BQ51 273 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 MFFQ9GZY8 342 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms