RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 UGT2B28Q9BY64 529 aa17.38■□□□□ 0.37
HLA-DRB1-201ENST00000360004 TP63Q9H3D4 680 aaPredicted RBP17.38■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ARL8BQ9NVJ2 186 aa17.38■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NBASA2RRP1 2371 aa17.38■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CLDN24A6NM45 220 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 H0Y3Z8 333 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 H3BML4 177 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 LINC01387J3KSC0 135 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GSTA4O15217 222 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 LRRTM2O43300 516 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZIC3O60481 467 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 THBS1P07996 1170 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 STSP08842 583 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PABPC4LP0CB38 370 aaKnown RBP17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ME2P23368 584 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CHMP24386 653 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 EIF1P41567 113 aaKnown RBP17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CA7P43166 264 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SLC7A2P52569 658 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SRYQ05066 204 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SF3B4Q15427 424 aaKnown RBP eCLIP17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GXYLT1Q4G148 440 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 HACD2Q6Y1H2 254 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 C3P1Q6ZMU1 363 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZNF836Q6ZNA1 936 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 FGD2Q7Z6J4 655 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ARMC8Q8IUR7 673 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZNF440Q8IYI8 595 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 UBQLNLQ8IYU4 475 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 OR2T12Q8NG77 320 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 TMEM234Q8WY98 164 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CNOT9Q92600 299 aaKnown RBP17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PNPLA3Q9NST1 481 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NDE1Q9NXR1 346 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 KLHL28Q9NXS3 571 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ADA2Q9NZK5 511 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ICAM5Q9UMF0 924 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SLC5A6Q9Y289 635 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZNF835Q9Y2P0 537 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 DSPPQ9NZW4 1301 aa17.37■□□□□ 0.37
HLA-DRB1-201ENST00000360004 OR2M5A3KFT3 312 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SHISA8B8ZZ34 492 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 LINGO3P0C6S8 592 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 RPS4Y1P22090 263 aaKnown RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PCGF2P35227 344 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PGM1P36871 562 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PSME3P61289 254 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CRYZQ08257 329 aaKnown RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 QPRTQ15274 297 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ADRM1Q16186 407 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 VMACQ2NL98 169 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PLPPR5Q32ZL2 321 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 C4orf17Q53FE4 359 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 VASNQ6EMK4 673 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 Q6ZPB1 254 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NET1Q7Z628 596 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PATL1Q86TB9 770 aaKnown RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PTOV1Q86YD1 416 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 MEIOBQ8N635 442 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 FITM2Q8N6M3 262 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GPR119Q8TDV5 335 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 REXO5Q96IC2 774 aaKnown RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 RNF145Q96MT1 663 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 TIMP4Q99727 224 aa17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 EXOSC3Q9NQT5 275 aaKnown RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GPC6Q9Y625 555 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CFAP73A6NFT4 308 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CCT8L1PA6NM43 557 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 FAM220BPB1ANY3 271 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 B4DXG7 233 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SEC14L5O43304 696 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 WDR1O75083 606 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PEPDP12955 493 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GP1BBP13224 206 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GABRA1P14867 456 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZNF17P17021 662 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 STARP49675 285 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 COPZ1P61923 177 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 FOXF1Q12946 379 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 KRT72Q14CN4 511 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NHSL2Q5HYW2 709 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 RNF220Q5VTB9 566 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 AP1ARQ63HQ0 302 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 FAM91A1Q658Y4 838 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 MTFR2Q6P444 385 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 C16orf89Q6UX73 402 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZNF550Q7Z398 422 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 DOLPP1Q86YN1 238 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CHERPQ8IWX8 916 aaKnown RBP17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 BHLHE22Q8NFJ8 381 aaPredicted RBP17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 FBXO27Q8NI29 283 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NSL1Q96IY1 281 aa17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 DNAJB12Q9NXW2 375 aaKnown RBP17.35■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CDHR4A6H8M9 788 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NCKAP5O14513 1909 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GMNNO75496 209 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 IFNA14P01570 189 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ACVR2AP27037 513 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PRKAR1BP31321 381 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GFRA1P56159 465 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms