RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CTU2Q2VPK5 515 aaKnown RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 SOWAHCQ53LP3 525 aaPredicted RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 RTN4RL1Q86UN2 441 aaPredicted RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 TANKQ92844 425 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 RLIMQ9NVW2 624 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 C2orf42Q9NWW7 574 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 SLC25A37Q9NYZ2 338 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 SLC35A3Q9Y2D2 325 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NAALAD2Q9Y3Q0 740 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 SNX11Q9Y5W9 270 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 H7C417 338 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 GOSR2O14653 212 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 IGLV3-25P01717 112 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NPPBP16860 134 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PTPN6P29350 595 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 SSTR2P30874 369 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 IDUAP35475 653 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 CTBSQ01459 385 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PLGLB1Q02325 96 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 GAB1Q13480 694 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PLK5Q496M5 336 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 ZNF322Q6U7Q0 402 aaPredicted RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 OR52R1Q8NGF1 315 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 OR6T1Q8NGN1 323 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 OR13C2Q8NGS9 318 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 ZNF417Q8TAU3 575 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NECAB3Q96P71 396 aaPredicted RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 CLEC2DQ9UHP7 191 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 V9GY05 133 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 BORCS7-ASMTA0A0B4J1R7 106 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 GABRA5P31644 462 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 RGS19P49795 217 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 GBX1Q14549 363 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 MRPL2Q5T653 305 aaKnown RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 KIAA1211LQ6NV74 962 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 OR5K2Q8NHB8 316 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 ZNF443Q9Y2A4 671 aaPredicted RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 OR2A25A4D2G3 310 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 A8MVJ9 347 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 RAD51DO75771 328 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 CLEC2LP0C7M8 214 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 AQP2P41181 271 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 SOX9P48436 509 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 PDX1P52945 283 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 SERTAD2Q14140 314 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 TCTE1Q5JU00 501 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 ATAD3CQ5T2N8 411 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 ARSKQ6UWY0 536 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 SFXN5Q8TD22 340 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 ADAMTS14Q8WXS8 1223 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 MR1Q95460 341 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 UHRF1Q96T88 793 aaPredicted RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 MEPEQ9NQ76 525 aaPredicted RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 HCFC2Q9Y5Z7 792 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 C17orf105B2RV13 164 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 I6L893 689 aaPredicted RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 DUX1O43812 170 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 GPR75O95800 540 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 TIMP1P01033 207 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 EGFP01133 1207 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 GNRHRP30968 328 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 LRIF1Q5T3J3 769 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 TMEM164Q5U3C3 297 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 MFFQ9GZY8 342 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 RCE1Q9Y256 329 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 PCDHGA6Q9Y5G7 932 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 TPRP12270 2363 aaKnown RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 NAP1L6A6NFF2 107 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 PRKRAO75569 313 aaKnown RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 SLCO2B1O94956 709 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 SYPP08247 313 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 CPMP14384 443 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 ELAVL4P26378 380 aaKnown RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 EVI2BP34910 448 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 POU4F3Q15319 338 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
VCP-201ENST00000358901 ZNF852Q6ZMS4 543 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 Q6ZSR6 202 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 MFSD8Q8NHS3 518 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 SYNPRQ8TBG9 265 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 LPAR4Q99677 370 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 MS4A8Q9BY19 250 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 PRDM9Q9NQV7 894 aa12.84□□□□□ -0.35
VCP-201ENST00000358901 TMEM202A6NGA9 273 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 ZNF850A8MQ14 1090 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 H3BML4 177 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 PRAF2O60831 178 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 PNMTP11086 282 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms